RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 IRF7Q92985 503 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 INTS4Q96HW7 963 aaKnown RBP13.32□□□□□ -0.28
TPM3-204ENST00000323144 HINFPQ9BQA5 517 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 CHRDQ9H2X0 955 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 ATXN3LQ9H3M9 355 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 PCIF1Q9H4Z3 704 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 RBM12Q9NTZ6 932 aaKnown RBP13.32□□□□□ -0.28
TPM3-204ENST00000323144 PANK4Q9NVE7 773 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 SIX4Q9UIU6 781 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 FBXO4Q9UKT5 387 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 DSEQ9UL01 958 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 EXOC7Q9UPT5 735 aa13.32□□□□□ -0.28
TPM3-204ENST00000323144 KPNA7A9QM74 516 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 ZNF263O14978 683 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 KINO60870 393 aaKnown RBP13.31□□□□□ -0.28
TPM3-204ENST00000323144 HAPLN1P10915 354 aaPredicted RBP13.31□□□□□ -0.28
TPM3-204ENST00000323144 TDGF1P13385 188 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 CCNE1P24864 410 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 MAGEA9P43362 315 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 FCHO2Q0JRZ9 810 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 GAS6Q14393 721 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 VEPH1Q14D04 833 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 TXNDC11Q6PKC3 985 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 TMEM150AQ86TG1 271 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 METTL23Q86XA0 190 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 ARID3BQ8IVW6 561 aaPredicted RBP13.31□□□□□ -0.28
TPM3-204ENST00000323144 MFSD6LQ8IWD5 586 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 KIAA2013Q8IYS2 634 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 LINC00301Q8NCQ3 95 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 FAM3CQ92520 227 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 PDE11AQ9HCR9 933 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 AGAP1Q9UPQ3 857 aa13.31□□□□□ -0.28
TPM3-204ENST00000323144 SMG5Q9UPR3 1016 aaKnown RBP13.31□□□□□ -0.28
TPM3-204ENST00000323144 GARTP22102 1010 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 CASP1P29466 404 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 HOXC13P31276 330 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 HOXD13P35453 343 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 TNK2Q07912 1038 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 ALCAMQ13740 583 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 ZNF528Q3MIS6 628 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 FOXD4L6Q3SYB3 417 aaPredicted RBP13.3□□□□□ -0.28
TPM3-204ENST00000323144 SHC4Q6S5L8 630 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 FOXD4L3Q6VB84 417 aaPredicted RBP13.3□□□□□ -0.28
TPM3-204ENST00000323144 ITIH5Q86UX2 942 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 CBWD2Q8IUF1 395 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 YAF2Q8IY57 180 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 SYCP3Q8IZU3 236 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 OR5B17Q8NGF7 314 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 SPPL2BQ8TCT7 592 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 DHX58Q96C10 678 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 PKMYT1Q99640 499 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 PI4K2AQ9BTU6 479 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 TNMDQ9H2S6 317 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 TRPV5Q9NQA5 729 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 GTSE1Q9NYZ3 720 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 HSFX1Q9UBD0 423 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 MRPS17Q9Y2R5 130 aaKnown RBP13.3□□□□□ -0.28
TPM3-204ENST00000323144 ASB3Q9Y575 518 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 GPR179Q6PRD1 2367 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 CACNA1AO00555 2505 aa13.3□□□□□ -0.28
TPM3-204ENST00000323144 F5P12259 2224 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 SPTLC2O15270 562 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 EXTL3O43909 919 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 KRT19P08727 400 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 TMEM191BP0C7N4 346 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 HMGA1P17096 107 aaKnown RBP13.29□□□□□ -0.28
TPM3-204ENST00000323144 PAX3P23760 479 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 CTHP32929 405 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 PSMC1P62191 440 aaKnown RBP13.29□□□□□ -0.28
TPM3-204ENST00000323144 ASIC1P78348 528 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 SATB1Q01826 763 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 POU5F1Q01860 360 aaKnown RBP13.29□□□□□ -0.28
TPM3-204ENST00000323144 DMWDQ09019 674 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 PKP1Q13835 747 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 POSTNQ15063 836 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 ARHGAP15Q53QZ3 475 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 INTS6LQ5JSJ4 861 aaKnown RBP13.29□□□□□ -0.28
TPM3-204ENST00000323144 NT5DC4Q86YG4 428 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 ADGRF2Q8IZF7 708 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 GPD1LQ8N335 351 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 LRRC52Q8N7C0 313 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 ZBTB44Q8NCP5 570 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 LEO1Q8WVC0 666 aaPredicted RBP13.29□□□□□ -0.28
TPM3-204ENST00000323144 NELL1Q92832 810 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 RMDN1Q96DB5 314 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 GCNAQ96QF7 691 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 TRIM9Q9C026 710 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 SEMA4AQ9H3S1 761 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 ZSCAN16Q9H4T2 348 aaPredicted RBP13.29□□□□□ -0.28
TPM3-204ENST00000323144 C2orf42Q9NWW7 574 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 DDX43Q9NXZ2 648 aaKnown RBP13.29□□□□□ -0.28
TPM3-204ENST00000323144 TFIP11Q9UBB9 837 aaKnown RBP13.29□□□□□ -0.28
TPM3-204ENST00000323144 ITGA11Q9UKX5 1188 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 CCL26Q9Y258 94 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 PCDHGA2Q9Y5H1 932 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 DNAH14Q0VDD8 3507 aa13.29□□□□□ -0.28
TPM3-204ENST00000323144 SPECC1L-ADORA2AF8WAN1 911 aa13.28□□□□□ -0.28
TPM3-204ENST00000323144 MAN2B1O00754 1011 aa13.28□□□□□ -0.28
TPM3-204ENST00000323144 CHADO15335 359 aa13.28□□□□□ -0.28
TPM3-204ENST00000323144 LILRB5O75023 590 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms