RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 EVPLQ92817 2033 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 SLC15A5A6NIM6 579 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 MED7O43513 233 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 PPFIA2O75334 1257 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 CDH5P33151 784 aaPredicted RBP8.01□□□□□ -1.13
IFT88-201ENST00000319980 OGDHQ02218 1023 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 PPARDQ03181 441 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 IFFO1Q0D2I5 559 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 ZNF252P-AS1Q0IIN9 211 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 CALCOCO2Q13137 446 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 KAZNQ674X7 775 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 KATNAL2Q8IYT4 538 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 SLC4A11Q8NBS3 891 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 MAIP1Q8WWC4 291 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 KIF12Q96FN5 646 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 CCDC114Q96M63 670 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 SYNCQ9H7C4 482 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 CDHR5Q9HBB8 845 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 DPP3Q9NY33 737 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 MTRF1LQ9UGC7 380 aaKnown RBP8.01□□□□□ -1.13
IFT88-201ENST00000319980 PARP2Q9UGN5 583 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 ASIC3Q9UHC3 531 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 CYTH4Q9UIA0 394 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 TCRBV5S1A1TA0A578 114 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 CILPO75339 1184 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 KRT3P12035 628 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 HOXD8P13378 290 aaPredicted RBP8.01□□□□□ -1.13
IFT88-201ENST00000319980 KRT10P13645 584 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 ATF7P17544 494 aaPredicted RBP8.01□□□□□ -1.13
IFT88-201ENST00000319980 ATICP31939 592 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 HPDP32754 393 aaPredicted RBP8.01□□□□□ -1.13
IFT88-201ENST00000319980 RFC1P35251 1148 aaPredicted RBP8.01□□□□□ -1.13
IFT88-201ENST00000319980 VPS41P49754 854 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 PMS2P54278 862 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 PTPN11Q06124 597 aaPredicted RBP8.01□□□□□ -1.13
IFT88-201ENST00000319980 NFX1Q12986 1120 aaKnown RBP8.01□□□□□ -1.13
IFT88-201ENST00000319980 KLF1Q13351 362 aaPredicted RBP8.01□□□□□ -1.13
IFT88-201ENST00000319980 ODF2Q5BJF6 829 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 CATSPER4Q7RTX7 472 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 ZNF410Q86VK4 478 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 C3orf20Q8ND61 904 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 EXD1Q8NHP7 514 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 ACSF2Q96CM8 615 aaPredicted RBP8.01□□□□□ -1.13
IFT88-201ENST00000319980 TMEM176AQ96HP8 235 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 HEXIM2Q96MH2 286 aaKnown RBP8.01□□□□□ -1.13
IFT88-201ENST00000319980 OSMRQ99650 979 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 TXLNGYQ9BZA5 131 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 CXCL16Q9H2A7 254 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 SEMA4AQ9H3S1 761 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 TMBIM4Q9HC24 238 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 RNF19AQ9NV58 838 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 HES2Q9Y543 173 aa8.01□□□□□ -1.13
IFT88-201ENST00000319980 RRN3P2A6NIE6 340 aa8□□□□□ -1.13
IFT88-201ENST00000319980 HMGB1P1B2RPK0 211 aaPredicted RBP8□□□□□ -1.13
IFT88-201ENST00000319980 IGF2BP3O00425 579 aaKnown RBP eCLIP8□□□□□ -1.13
IFT88-201ENST00000319980 NPTXRO95502 500 aa8□□□□□ -1.13
IFT88-201ENST00000319980 PAEPP09466 180 aa8□□□□□ -1.13
IFT88-201ENST00000319980 SMIM10L2AP0DMW4 78 aa8□□□□□ -1.13
IFT88-201ENST00000319980 SMIM10L2BP0DMW5 78 aa8□□□□□ -1.13
IFT88-201ENST00000319980 P4HA1P13674 534 aa8□□□□□ -1.13
IFT88-201ENST00000319980 HOXA11P31270 313 aaPredicted RBP8□□□□□ -1.13
IFT88-201ENST00000319980 GBP1P32455 592 aa8□□□□□ -1.13
IFT88-201ENST00000319980 MAN1A1P33908 653 aa8□□□□□ -1.13
IFT88-201ENST00000319980 IRAK1P51617 712 aa8□□□□□ -1.13
IFT88-201ENST00000319980 PSMC1P62191 440 aaKnown RBP8□□□□□ -1.13
IFT88-201ENST00000319980 ADCY2Q08462 1091 aa8□□□□□ -1.13
IFT88-201ENST00000319980 PIGHQ14442 188 aaPredicted RBP8□□□□□ -1.13
IFT88-201ENST00000319980 KYAT1Q16773 422 aa8□□□□□ -1.13
IFT88-201ENST00000319980 KRT71Q3SY84 523 aa8□□□□□ -1.13
IFT88-201ENST00000319980 TXNRD3NBQ6F5E7 133 aa8□□□□□ -1.13
IFT88-201ENST00000319980 LRRC31Q6UY01 552 aa8□□□□□ -1.13
IFT88-201ENST00000319980 RUFY4Q6ZNE9 571 aa8□□□□□ -1.13
IFT88-201ENST00000319980 CCDC25Q86WR0 208 aa8□□□□□ -1.13
IFT88-201ENST00000319980 CPXM1Q96SM3 734 aa8□□□□□ -1.13
IFT88-201ENST00000319980 DCLK3Q9C098 648 aa8□□□□□ -1.13
IFT88-201ENST00000319980 ELOVL4Q9GZR5 314 aa8□□□□□ -1.13
IFT88-201ENST00000319980 LHX5Q9H2C1 402 aa8□□□□□ -1.13
IFT88-201ENST00000319980 PABPC3Q9H361 631 aaKnown RBP8□□□□□ -1.13
IFT88-201ENST00000319980 RABEP2Q9H5N1 569 aa8□□□□□ -1.13
IFT88-201ENST00000319980 SNTG2Q9NY99 539 aa8□□□□□ -1.13
IFT88-201ENST00000319980 FLRT1Q9NZU1 646 aa8□□□□□ -1.13
IFT88-201ENST00000319980 FEZ2Q9UHY8 353 aaPredicted RBP8□□□□□ -1.13
IFT88-201ENST00000319980 STRIP2Q9ULQ0 834 aa8□□□□□ -1.13
IFT88-201ENST00000319980 C2CD2Q9Y426 696 aa8□□□□□ -1.13
IFT88-201ENST00000319980 DNAH12Q6ZR08 3092 aa8□□□□□ -1.13
IFT88-201ENST00000319980 NRCAMQ92823 1304 aa8□□□□□ -1.13
IFT88-201ENST00000319980 GAS8O95995 478 aa8□□□□□ -1.13
IFT88-201ENST00000319980 NR1D1P20393 614 aa8□□□□□ -1.13
IFT88-201ENST00000319980 CYP2B6P20813 491 aa8□□□□□ -1.13
IFT88-201ENST00000319980 CETN2P41208 172 aa8□□□□□ -1.13
IFT88-201ENST00000319980 ZNF157P51786 506 aaPredicted RBP8□□□□□ -1.13
IFT88-201ENST00000319980 GNGT1P63211 74 aa8□□□□□ -1.13
IFT88-201ENST00000319980 RBP5P82980 135 aa8□□□□□ -1.13
IFT88-201ENST00000319980 MAP2K5Q13163 448 aa8□□□□□ -1.13
IFT88-201ENST00000319980 SLC29A2Q14542 456 aa8□□□□□ -1.13
IFT88-201ENST00000319980 CCL14Q16627 93 aa8□□□□□ -1.13
IFT88-201ENST00000319980 PPP1R15BQ5SWA1 713 aa8□□□□□ -1.13
IFT88-201ENST00000319980 OLFML2BQ68BL8 750 aa8□□□□□ -1.13
IFT88-201ENST00000319980 TLK2Q86UE8 772 aa8□□□□□ -1.13
IFT88-201ENST00000319980 EMC1Q8N766 993 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms