RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 STK10O94804 968 aaKnown RBP10.16□□□□□ -0.78
PTPRA-202ENST00000318266 HLA-DOAP06340 250 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 PEX3P56589 373 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 CENPCQ03188 943 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 NFIL3Q16649 462 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 C3orf62Q6ZUJ4 267 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 APLFQ8IW19 511 aaPredicted RBP10.16□□□□□ -0.78
PTPRA-202ENST00000318266 HELQQ8TDG4 1101 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 DDX1Q92499 740 aaKnown RBP10.16□□□□□ -0.78
PTPRA-202ENST00000318266 PAFAH2Q99487 392 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 ZNF577Q9BSK1 485 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 ASCC2Q9H1I8 757 aaPredicted RBP10.16□□□□□ -0.78
PTPRA-202ENST00000318266 ZNF395Q9H8N7 513 aaPredicted RBP10.16□□□□□ -0.78
PTPRA-202ENST00000318266 TUFT1Q9NNX1 390 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 GINM1Q9NU53 330 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 LARSQ9P2J5 1176 aaKnown RBP10.16□□□□□ -0.78
PTPRA-202ENST00000318266 PDP2Q9P2J9 529 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 PPARGC1AQ9UBK2 798 aaKnown RBP10.16□□□□□ -0.78
PTPRA-202ENST00000318266 ATRNL1Q5VV63 1379 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 MEI4A8MW99 385 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 E5RJQ4 531 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 RNASEH1O60930 286 aaKnown RBP10.16□□□□□ -0.78
PTPRA-202ENST00000318266 PSMD10O75832 226 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 ABHD2P08910 425 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 ADSSP30520 456 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 GPX6P59796 221 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 RASA2Q15283 850 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 SNRNP35Q16560 246 aaKnown RBP10.16□□□□□ -0.78
PTPRA-202ENST00000318266 C1orf146Q5VVC0 180 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 RIPOR1Q6ZS17 1223 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 RHPN2Q8IUC4 686 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 PYROXD1Q8WU10 500 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 NMD3Q96D46 503 aaKnown RBP10.16□□□□□ -0.78
PTPRA-202ENST00000318266 MECRQ9BV79 373 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 POLLQ9UGP5 575 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 NARFQ9UHQ1 456 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 PPM1HQ9ULR3 514 aa10.16□□□□□ -0.78
PTPRA-202ENST00000318266 GAKO14976 1311 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 TXNDC9O14530 226 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 FOSP01100 380 aaPredicted RBP10.15□□□□□ -0.78
PTPRA-202ENST00000318266 ANPEPP15144 967 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 GLRA2P23416 452 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 GEMIN4P57678 1058 aaKnown RBP10.15□□□□□ -0.78
PTPRA-202ENST00000318266 CDK16Q00536 496 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 DSG1Q02413 1049 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 DYNC1I2Q13409 638 aaKnown RBP10.15□□□□□ -0.78
PTPRA-202ENST00000318266 ALCAMQ13740 583 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 BBS9Q3SYG4 887 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 MSS51Q4VC12 460 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 CENPUQ71F23 418 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 HAUS6Q7Z4H7 955 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 RHOT1Q8IXI2 618 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 RBM15BQ8NDT2 890 aaKnown RBP10.15□□□□□ -0.78
PTPRA-202ENST00000318266 JDP2Q8WYK2 163 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 TTC25Q96NG3 672 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 SPATA16Q9BXB7 569 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 EBF3Q9H4W6 596 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 KCNK13Q9HB14 408 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 DMAP1Q9NPF5 467 aaPredicted RBP10.15□□□□□ -0.78
PTPRA-202ENST00000318266 NDE1Q9NXR1 346 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 SENP1Q9P0U3 644 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 ATP2A1O14983 1001 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 CREB3O43889 395 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 LPXNO60711 386 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 KRT1P04264 644 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 YBX3P16989 372 aaKnown RBP eCLIP10.15□□□□□ -0.783e-7■■□□□ 13.1
PTPRA-202ENST00000318266 NRLP54845 237 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 NFX1Q12986 1120 aaKnown RBP10.15□□□□□ -0.78
PTPRA-202ENST00000318266 HIF1AQ16665 826 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 ANKRD22Q5VYY1 191 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 KRT39Q6A163 491 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 MFSD7Q6UXD7 560 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 RAPH1Q70E73 1250 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 NLRX1Q86UT6 975 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 TREML1Q86YW5 311 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 PYDC1Q8WXC3 89 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 ITFG2Q969R8 447 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 OPTNQ96CV9 577 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 BICD1Q96G01 975 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 OXNAD1Q96HP4 312 aaPredicted RBP10.15□□□□□ -0.78
PTPRA-202ENST00000318266 ACCSQ96QU6 501 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 SMYD3Q9H7B4 428 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 PREBQ9HCU5 417 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 ETNK2Q9NVF9 386 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 ZNF212Q9UDV6 495 aa10.15□□□□□ -0.78
PTPRA-202ENST00000318266 CLUHO75153 1309 aa10.15□□□□□ -0.79
PTPRA-202ENST00000318266 LIASO43766 372 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 PROSCO94903 275 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 OR6B1O95007 311 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 NDUFB10O96000 172 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 RARBP10826 455 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 SLC1A1P43005 524 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 ALDH18A1P54886 795 aaKnown RBP10.14□□□□□ -0.79
PTPRA-202ENST00000318266 DEUP1Q05D60 604 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 SPOPLQ6IQ16 392 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 SLC9A9Q8IVB4 645 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 KLRG1Q96E93 195 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 DNAJC1Q96KC8 554 aaKnown RBP10.14□□□□□ -0.79
PTPRA-202ENST00000318266 PANX3Q96QZ0 392 aa10.14□□□□□ -0.79
PTPRA-202ENST00000318266 ECSITQ9BQ95 431 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms