RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 ZNF317Q96PQ6 595 aaPredicted RBP7.9□□□□□ -1.14
CDHR3-201ENST00000317716 ZNF184Q99676 751 aaPredicted RBP7.9□□□□□ -1.14
CDHR3-201ENST00000317716 SIKE1Q9BRV8 207 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 GLT8D2Q9H1C3 349 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 NMRK2Q9NPI5 230 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 AGPAT3Q9NRZ7 376 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 PDP2Q9P2J9 529 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 DAGLAQ9Y4D2 1042 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 APRTP07741 180 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 PYGBP11216 843 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 FOXN2P32314 431 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 CASP2P42575 452 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 TUBP50607 506 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 HIRAP54198 1017 aaPredicted RBP7.9□□□□□ -1.14
CDHR3-201ENST00000317716 DLG4P78352 724 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 FOXD4Q12950 439 aaPredicted RBP7.9□□□□□ -1.14
CDHR3-201ENST00000317716 SLC44A4Q53GD3 710 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 MAP3K21Q5TCX8 1036 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 ATG16L1Q676U5 607 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 TTC7BQ86TV6 843 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 CBWD2Q8IUF1 395 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 RFWD2Q8NHY2 731 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 FAM81AQ8TBF8 368 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 DNAJC19Q96DA6 116 aa7.9□□□□□ -1.14
CDHR3-201ENST00000317716 TMA16Q96EY4 203 aaKnown RBP7.9□□□□□ -1.14
CDHR3-201ENST00000317716 MRPL47Q9HD33 250 aaKnown RBP7.9□□□□□ -1.14
CDHR3-201ENST00000317716 PIH1D1Q9NWS0 290 aaKnown RBP7.9□□□□□ -1.14
CDHR3-201ENST00000317716 RPTORQ8N122 1335 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 ATXN2Q99700 1313 aaKnown RBP7.9□□□□□ -1.15
CDHR3-201ENST00000317716 DENND3A2RUS2 1198 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 H0YGN5 161 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 HSPA4LO95757 839 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 APOEP02649 317 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 TAC1P20366 129 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 ACOT2P49753 483 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 RAB27AP51159 221 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 GALK1P51570 392 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 ZNF200P98182 395 aaPredicted RBP7.9□□□□□ -1.15
CDHR3-201ENST00000317716 SLC25A3Q00325 362 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 TSPY1Q01534 308 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 KLRC3Q07444 240 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 NR1H3Q13133 447 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 EFTUD2Q15029 972 aaKnown RBP eCLIP7.9□□□□□ -1.15
CDHR3-201ENST00000317716 CENPTQ96BT3 561 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 TLCD1Q96CP7 247 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 MCEEQ96PE7 176 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 BTBD10Q9BSF8 475 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 EBF2Q9HAK2 575 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 HSPBP1Q9NZL4 362 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 PAIP2BQ9ULR5 123 aaKnown RBP7.9□□□□□ -1.15
CDHR3-201ENST00000317716 SLC12A4Q9UP95 1085 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 CHKBQ9Y259 395 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 NFS1Q9Y697 457 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 ARFGEF2Q9Y6D5 1785 aa7.9□□□□□ -1.15
CDHR3-201ENST00000317716 GIPC1O14908 333 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 TBC1D12O60347 775 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 MYCP01106 439 aaPredicted RBP7.89□□□□□ -1.15
CDHR3-201ENST00000317716 TPBGLP0DKB5 382 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 NPEPPSP55786 919 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 ESRRGP62508 458 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 IL1RL1Q01638 556 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 CAV1Q03135 178 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 FASTKD3Q14CZ7 662 aaKnown RBP7.89□□□□□ -1.15
CDHR3-201ENST00000317716 LPCAT4Q643R3 524 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 RSBN1LQ6PCB5 846 aaPredicted RBP7.89□□□□□ -1.15
CDHR3-201ENST00000317716 LAYNQ6UX15 382 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 MOB2Q70IA6 237 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 HAUS6Q7Z4H7 955 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 PIGWQ7Z7B1 504 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 TRIM74Q86UV6 250 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 TRIM73Q86UV7 250 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 ALYREFQ86V81 257 aaKnown RBP7.89□□□□□ -1.15
CDHR3-201ENST00000317716 MYLK4Q86YV6 388 aaPredicted RBP7.89□□□□□ -1.15
CDHR3-201ENST00000317716 CDAN1Q8IWY9 1227 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 ZFPM1Q8IX07 1006 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 NDUFAF2Q8N183 169 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 FAM71DQ8N9W8 422 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 CCNYQ8ND76 341 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 HES6Q96HZ4 224 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 PAFAH2Q99487 392 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 EPAS1Q99814 870 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 WWP1Q9H0M0 922 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 MTMR4Q9NYA4 1195 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 SEPT9Q9UHD8 586 aaPredicted RBP7.89□□□□□ -1.15
CDHR3-201ENST00000317716 COG5Q9UP83 839 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 R3HDM2Q9Y2K5 976 aaKnown RBP7.89□□□□□ -1.15
CDHR3-201ENST00000317716 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.89□□□□□ -1.15
CDHR3-201ENST00000317716 PDE4DIPQ5VU43 2346 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 GOLGA8QA0A0J9YX86 632 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 GOLGA8OA6NCC3 632 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 GOLGA8NF8WBI6 632 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 GRAP2O75791 330 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 ZBED1O96006 694 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 NUDT17P0C025 328 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 GNA15P30679 374 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 USP46P62068 366 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 ORC1Q13415 861 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 SLC1A5Q15758 541 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 MTERF2Q49AM1 385 aa7.89□□□□□ -1.15
CDHR3-201ENST00000317716 CYP4A22Q5TCH4 519 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms