RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 ITKQ08881 620 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 CCNG2Q16589 344 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 TSNAXIP1Q2TAA8 658 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 SDCCAG8Q86SQ7 713 aaPredicted RBP14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 FAM71DQ8N9W8 422 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 ZSWIM2Q8NEG5 633 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 SCYL1Q96KG9 808 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 DCLK3Q9C098 648 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 ALG13Q9NP73 1137 aaKnown RBP14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 GPRC5DQ9NZD1 345 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 SENP1Q9P0U3 644 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 XPO7Q9UIA9 1087 aaKnown RBP14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 CHMP2BQ9UQN3 213 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 NFASCO94856 1347 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 SPATA31C2B4DYI2 1134 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 KRT38O76015 456 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 GPD1P21695 349 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 HOXD13P35453 343 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 NME3Q13232 169 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 GLRA4Q5JXX5 417 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 TRIM55Q9BYV6 548 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 KLHL8Q9P2G9 620 aaPredicted RBP14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 IQCA1LA6NCM1 817 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 FAM47DPA6NHR8 397 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 NPTXRO95502 500 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 LSM8O95777 96 aaKnown RBP14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 CYP1A2P05177 515 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 GNAT1P11488 350 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 PEX19P40855 299 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 TMPRSS15P98073 1019 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 RNASELQ05823 741 aaKnown RBP14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 STILQ15468 1287 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 ZACNQ401N2 412 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 GPC2Q8N158 579 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 MTMR14Q8NCE2 650 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 TMEM121Q9BTD3 319 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 ZNF518BQ9C0D4 1074 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 MROH8Q9H579 483 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 RSAD1Q9HA92 442 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 STAP1Q9ULZ2 295 aa14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 DDX60Q8IY21 1712 aaKnown RBP14.09□□□□□ -0.15
PCDHB9-201ENST00000316105 ARHGAP42A6NI28 874 aa14.08□□□□□ -0.15
PCDHB9-201ENST00000316105 INSRRP14616 1297 aa14.08□□□□□ -0.15
PCDHB9-201ENST00000316105 GOLGA7BQ2TAP0 167 aa14.08□□□□□ -0.15
PCDHB9-201ENST00000316105 SPOCD1Q6ZMY3 1216 aa14.08□□□□□ -0.15
PCDHB9-201ENST00000316105 CDKL3Q8IVW4 592 aaPredicted RBP14.08□□□□□ -0.15
PCDHB9-201ENST00000316105 LRRC34Q8IZ02 419 aa14.08□□□□□ -0.15
PCDHB9-201ENST00000316105 CYTH2Q99418 400 aa14.08□□□□□ -0.15
PCDHB9-201ENST00000316105 MYH10P35580 1976 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 RIPK2O43353 540 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 LPXNO60711 386 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 DCTN3O75935 186 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 PRPSAP1Q14558 356 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 DAB2IPQ5VWQ8 1189 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 C3orf62Q6ZUJ4 267 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 OR5B17Q8NGF7 314 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 AFG1LQ8WV93 481 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 OPTNQ96CV9 577 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 FAM193BQ96PV7 902 aaPredicted RBP14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 LRRC37BQ96QE4 947 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 DDX23Q9BUQ8 820 aaKnown RBP14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 DPP3Q9NY33 737 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 USP15Q9Y4E8 981 aaPredicted RBP14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 ZNF862O60290 1169 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 SLC26A2P50443 739 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 CDH8P55286 799 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 SKOR1P84550 965 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 ARL13BQ3SXY8 428 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 ZNF484Q5JVG2 852 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 RAPH1Q70E73 1250 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 VCPIP1Q96JH7 1222 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 KLF6Q99612 283 aaPredicted RBP14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 PSMC3IPQ9P2W1 217 aaPredicted RBP14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 INPP5FQ9Y2H2 1132 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 IRF6O14896 467 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 MAP3K6O95382 1288 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 RPSAP08865 295 aaKnown RBP14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 CYP2C9P11712 490 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 CTCFP49711 727 aaPredicted RBP14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 OTUD4Q01804 1114 aaKnown RBP14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 CAPSQ13938 189 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 KIZQ2M2Z5 673 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 IQCKQ8N0W5 287 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 KLRG1Q96E93 195 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 MFSD14AQ96MC6 490 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 SMYD2Q9NRG4 433 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 POLIQ9UNA4 740 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 COG5Q9UP83 839 aa14.08□□□□□ -0.16
PCDHB9-201ENST00000316105 TTC4O95801 387 aa14.07□□□□□ -0.16
PCDHB9-201ENST00000316105 RARBP10826 455 aa14.07□□□□□ -0.16
PCDHB9-201ENST00000316105 PTPN11Q06124 597 aaPredicted RBP14.07□□□□□ -0.16
PCDHB9-201ENST00000316105 MCL1Q07820 350 aa14.07□□□□□ -0.16
PCDHB9-201ENST00000316105 AP1B1Q10567 949 aa14.07□□□□□ -0.16
PCDHB9-201ENST00000316105 AMHR2Q16671 573 aa14.07□□□□□ -0.16
PCDHB9-201ENST00000316105 SGSM3Q96HU1 749 aa14.07□□□□□ -0.16
PCDHB9-201ENST00000316105 TNIP3Q96KP6 325 aa14.07□□□□□ -0.16
PCDHB9-201ENST00000316105 SLC13A1Q9BZW2 595 aa14.07□□□□□ -0.16
PCDHB9-201ENST00000316105 ARL2BPQ9Y2Y0 163 aa14.07□□□□□ -0.16
PCDHB9-201ENST00000316105 STRCQ7RTU9 1775 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms