RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 ITGB1P05556 798 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 MED14OSP0DP75 135 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 SRGNP10124 158 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 TAL1P17542 331 aaPredicted RBP4.77□□□□□ -1.65
SMCO3-201ENST00000316048 PTH1RQ03431 593 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 ATP2B3Q16720 1220 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 ARHGAP15Q53QZ3 475 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 FANCBQ8NB91 859 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 GLIS1Q8NBF1 620 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 SHCBP1Q8NEM2 672 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 LCORQ96JN0 433 aaPredicted RBP4.77□□□□□ -1.65
SMCO3-201ENST00000316048 TLR10Q9BXR5 811 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 CPEB1Q9BZB8 566 aaKnown RBP4.77□□□□□ -1.65
SMCO3-201ENST00000316048 ITM2CQ9NQX7 267 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 CFAP97Q9P2B7 532 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 IGSF9Q9P2J2 1179 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 MID2Q9UJV3 735 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 PLXNC1O60486 1568 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 ABCA9Q8IUA7 1624 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 ERBINQ96RT1 1412 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 ABCC1P33527 1531 aa4.77□□□□□ -1.65
SMCO3-201ENST00000316048 HOXA3O43365 443 aaPredicted RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 SKAP2O75563 359 aaPredicted RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 CNOT4O95628 575 aaKnown RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 GNAI2P04899 355 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 C1QTNF9P0C862 333 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 ITGA8P53708 1063 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 CLRN1P58418 232 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 RAB32Q13637 225 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 POSTNQ15063 836 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 TAF5Q15542 800 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 LMBRD2Q68DH5 695 aaPredicted RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 LVRNQ6Q4G3 990 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 RNF44Q7L0R7 432 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 SLC17A8Q8NDX2 589 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 FAM46DQ8NEK8 389 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 PNISRQ8TF01 805 aaKnown RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 STYXQ8WUJ0 223 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 RMDN3Q96TC7 470 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 GDF15Q99988 308 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 EIF2AK1Q9BQI3 630 aaKnown RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 C12orf65Q9H3J6 166 aaKnown RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 GPR35Q9HC97 309 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 RRN3Q9NYV6 651 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 ZNF212Q9UDV6 495 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 GTF2A1LQ9UNN4 478 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 SCAF8Q9UPN6 1271 aaKnown RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 SMG5Q9UPR3 1016 aaKnown RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 TRAPPC8Q9Y2L5 1435 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 C9orf118A6NHY6 69 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 ANP32CO43423 234 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 VPS4BO75351 444 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 RASSF9O75901 435 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 THP07101 528 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 SNRPA1P09661 255 aaKnown RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 HSPA5P11021 654 aaKnown RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 PIM1P11309 404 aaPredicted RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 CD53P19397 219 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 AFF3P51826 1226 aaKnown RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 BOP1Q14137 746 aaKnown RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 UBXN2BQ14CS0 331 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 ZACNQ401N2 412 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 ZFYVE27Q5T4F4 411 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 JMJD6Q6NYC1 403 aaPredicted RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 USP49Q70CQ1 688 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 USP37Q86T82 979 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 PAF1Q8N7H5 531 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 PDPRQ8NCN5 879 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 TBC1D15Q8TC07 691 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 PHACTR3Q96KR7 559 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 ZNF512Q96ME7 567 aaPredicted RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 TCF25Q9BQ70 676 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 IMPG2Q9BZV3 1241 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 VSX1Q9NZR4 365 aaPredicted RBP4.76□□□□□ -1.65
SMCO3-201ENST00000316048 SLC4A7Q9Y6M7 1214 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 SCAPERQ9BY12 1400 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 FAM135AQ9P2D6 1515 aa4.76□□□□□ -1.65
SMCO3-201ENST00000316048 MROH6A6NGR9 719 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 TBKBP1A7MCY6 615 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 THAP12O43422 761 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 CDC14BO60729 498 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 CHRM3P20309 590 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 KLRC1P26715 233 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 GABRB3P28472 473 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 MAPK9P45984 424 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 GRM1Q13255 1194 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 BMT2Q1RMZ1 405 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 NBPF8Q3BBV2 869 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 ZNF568Q3ZCX4 644 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 NOMO2Q5JPE7 1267 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 NSUN7Q8NE18 718 aaKnown RBP4.75□□□□□ -1.65
SMCO3-201ENST00000316048 NEIL1Q96FI4 390 aaPredicted RBP4.75□□□□□ -1.65
SMCO3-201ENST00000316048 LRRC37BQ96QE4 947 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 NELL2Q99435 816 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 NAP1L4Q99733 375 aaKnown RBP4.75□□□□□ -1.65
SMCO3-201ENST00000316048 ISCA1Q9BUE6 129 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 MS4A7Q9GZW8 240 aaPredicted RBP4.75□□□□□ -1.65
SMCO3-201ENST00000316048 CD320Q9NPF0 282 aa4.75□□□□□ -1.65
SMCO3-201ENST00000316048 A1CFQ9NQ94 594 aaKnown RBP4.75□□□□□ -1.65
SMCO3-201ENST00000316048 RLIMQ9NVW2 624 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms