RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 CHRNA3P32297 505 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 WHAMMP3Q1A5X7 153 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 Q4G0T1 1027 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 ITPRIPL1Q6GPH6 555 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 PPM1NQ8N819 430 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 LRRC8CQ8TDW0 803 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 TTC36A6NLP5 189 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 GPD1P21695 349 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 SMARCA1P28370 1054 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 SERPINB6P35237 376 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 AMPD2Q01433 879 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 SEC23AQ15436 765 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 TAF1BQ53T94 588 aaPredicted RBP9.44□□□□□ -0.9
CTC1-201ENST00000315684 BLOC1S5Q8TDH9 187 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 ZNF296Q8WUU4 475 aaPredicted RBP9.44□□□□□ -0.9
CTC1-201ENST00000315684 CELF4Q9BZC1 486 aaKnown RBP9.44□□□□□ -0.9
CTC1-201ENST00000315684 RNF186Q9NXI6 227 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 SENP1Q9P0U3 644 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 IRS2Q9Y4H2 1338 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 KIAA0391O15091 583 aaKnown RBP9.44□□□□□ -0.9
CTC1-201ENST00000315684 TLR2O60603 784 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 APRTP07741 180 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 RHOCP08134 193 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 MMP3P08254 477 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 VEGFBP49765 207 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 CUL2Q13617 745 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.44□□□□□ -0.9
CTC1-201ENST00000315684 AIPL1Q9NZN9 384 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 DSEQ9UL01 958 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 TTC26A0AVF1 554 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 TISP43B9A030 160 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 LHX1P48742 406 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 NAA25Q14CX7 972 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 HERC6Q8IVU3 1022 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 BRI3BPQ8WY22 251 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 KCND2Q9NZV8 630 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 WASP42768 502 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 ACADSBP45954 432 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 STX1BP61266 288 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 OCRLQ01968 901 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 DHX9Q08211 1270 aaKnown RBP9.44□□□□□ -0.9
CTC1-201ENST00000315684 KCNT1Q5JUK3 1230 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 TRIM72Q6ZMU5 477 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.44□□□□□ -0.9
CTC1-201ENST00000315684 RHOT1Q8IXI2 618 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 PPHLN1Q8NEY8 458 aaKnown RBP9.44□□□□□ -0.9
CTC1-201ENST00000315684 MAP3K14Q99558 947 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.44□□□□□ -0.9
CTC1-201ENST00000315684 RTN2O75298 545 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 SGPL1O95470 568 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 USP17L7P0C7H9 530 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 DPYDQ12882 1025 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 GIT2Q14161 759 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 EFHC1Q5JVL4 640 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.44□□□□□ -0.9
CTC1-201ENST00000315684 GAKO14976 1311 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 MOXD2PA6NHM9 499 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 FGFR1P11362 822 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 ADIGQ0VDE8 80 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 TSGA10IPQ3SY00 556 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.44□□□□□ -0.9
CTC1-201ENST00000315684 PTRHD1Q6GMV3 140 aaKnown RBP9.44□□□□□ -0.9
CTC1-201ENST00000315684 MFN1Q8IWA4 741 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 PHACTR4Q8IZ21 702 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 ASAP3Q8TDY4 903 aa9.44□□□□□ -0.9
CTC1-201ENST00000315684 FMN2Q9NZ56 1722 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 NDUFAB1O14561 156 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 CLCN1P35523 988 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 RARS2Q5T160 578 aaKnown RBP9.43□□□□□ -0.9
CTC1-201ENST00000315684 PBKQ96KB5 322 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 CLDND1Q9NY35 253 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 NDUFS3O75489 264 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 HSPA1AP0DMV8 641 aaKnown RBP9.43□□□□□ -0.9
CTC1-201ENST00000315684 HSPA1BP0DMV9 641 aaKnown RBP9.43□□□□□ -0.9
CTC1-201ENST00000315684 SEC13P55735 322 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 PPIGQ13427 754 aaKnown RBP eCLIP9.43□□□□□ -0.94e-6■■■□□ 15.7
CTC1-201ENST00000315684 TUBB2AQ13885 445 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 FAM131BQ86XD5 332 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 DNAAF5Q86Y56 855 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 CCDC170Q8IYT3 715 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 TUBB2BQ9BVA1 445 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 JRKLQ9Y4A0 524 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 ATP9AO75110 1047 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 NDST1P52848 882 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 SGCGQ13326 291 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 EARS2Q5JPH6 523 aaKnown RBP9.43□□□□□ -0.9
CTC1-201ENST00000315684 MEI1Q5TIA1 1274 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 OTOP1Q7RTM1 612 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 GAS2L3Q86XJ1 694 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 CDKL3Q8IVW4 592 aaPredicted RBP9.43□□□□□ -0.9
CTC1-201ENST00000315684 C4orf19Q8IY42 314 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 TTC17Q96AE7 1141 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 MAML3Q96JK9 1138 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.43□□□□□ -0.9
CTC1-201ENST00000315684 FAM50BQ9Y247 325 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 CALCAP01258 141 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 MMEP08473 750 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 ARSEP51690 589 aa9.43□□□□□ -0.9
CTC1-201ENST00000315684 CAPRIN1Q14444 709 aaKnown RBP9.43□□□□□ -0.9
CTC1-201ENST00000315684 SGO1Q5FBB7 561 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms