RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 USP33Q8TEY7 942 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 GTF3C2Q8WUA4 911 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-201ENST00000314191 WNK4Q96J92 1243 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 BEGAINQ9BUH8 593 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 ZFYVE28Q9HCC9 887 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 BTBD7Q9P203 1132 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 CDC42EP1Q00587 391 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 DNAJB3Q8WWF6 145 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 XPNPEP1Q9NQW7 623 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 H3BRJ5 948 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 CDH16O75309 829 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 KRT38O76015 456 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 MAGEA9P43362 315 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 CELF3Q5SZQ8 465 aaKnown RBP6.5□□□□□ -1.37
PRKDC-201ENST00000314191 ZNF536O15090 1300 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 RASSF10A6NK89 507 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 LACTBL1A8MY62 500 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 ADORA2AP29274 412 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 RPL21P46778 160 aaKnown RBP6.5□□□□□ -1.37
PRKDC-201ENST00000314191 ASPHQ12797 758 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 PPIL2Q13356 520 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 MFSD7Q6UXD7 560 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 BZW1Q7L1Q6 419 aaKnown RBP6.5□□□□□ -1.37
PRKDC-201ENST00000314191 TTC25Q96NG3 672 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 PPP1R12CQ9BZL4 782 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 COG5Q9UP83 839 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 RBAK-RBAKDNI3L0D1 243 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 NOMO3P69849 1222 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 JADE1Q6IE81 842 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 KIAA1841Q6NSI8 718 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 SPATA21Q7Z572 469 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 FAM71AQ8IYT1 594 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 RSRC1Q96IZ7 334 aaKnown RBP6.5□□□□□ -1.37
PRKDC-201ENST00000314191 CCDC78A2IDD5 438 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 CPB1P15086 417 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 PCK1P35558 622 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 FNTAP49354 379 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 NDST1P52848 882 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 TMPRSS15P98073 1019 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 FAM71DQ8N9W8 422 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 KATNAL1Q9BW62 490 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 ZNF518BQ9C0D4 1074 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.5□□□□□ -1.37
PRKDC-201ENST00000314191 TMEM120BA0PK00 339 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 CD4P01730 458 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 PAN2Q504Q3 1202 aaKnown RBP6.5□□□□□ -1.37
PRKDC-201ENST00000314191 SPATA18Q8TC71 538 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 C7orf43Q8WVR3 580 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 AGAP3Q96P47 875 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 CYTH2Q99418 400 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 AVENQ9NQS1 362 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-201ENST00000314191 XPO7Q9UIA9 1087 aaKnown RBP6.5□□□□□ -1.37
PRKDC-201ENST00000314191 ATRNL1Q5VV63 1379 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 KDM7AQ6ZMT4 941 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 TRIM55Q9BYV6 548 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 RRAGCQ9HB90 399 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 DMAC2Q9NW81 257 aa6.5□□□□□ -1.37
PRKDC-201ENST00000314191 VGLL3A8MV65 326 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 EEF2KO00418 725 aaKnown RBP6.49□□□□□ -1.37
PRKDC-201ENST00000314191 CRCPO75575 148 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 SRGAP2BP0DMP2 458 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 AKAP5P24588 427 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 APRTP07741 180 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 GCLCP48506 637 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-201ENST00000314191 SRLQ86TD4 932 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 SAE1Q9UBE0 346 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-201ENST00000314191 CPSF3Q9UKF6 684 aaKnown RBP6.49□□□□□ -1.37
PRKDC-201ENST00000314191 PCDHA2Q9Y5H9 948 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 FANCGO15287 622 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 KIAA0319LQ8IZA0 1049 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 CFAP61Q8NHU2 1237 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 ZBTB10Q96DT7 871 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 HES2Q9Y543 173 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 CCNG2Q16589 344 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 PPP4R1Q8TF05 950 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 TMEM176AQ96HP8 235 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 PLEKHA5Q9HAU0 1116 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 CST3P01034 146 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-201ENST00000314191 SLC4A1P02730 911 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 MCF2P10911 925 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 ESRRAP11474 423 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-201ENST00000314191 ACVR2BQ13705 512 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 DCAF6Q58WW2 860 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 ZBTB41Q5SVQ8 909 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 FAM131BQ86XD5 332 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 ARHGAP24Q8N264 748 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 PWWP2AQ96N64 755 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 TRABDQ9H4I3 376 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 TSPAN16Q9UKR8 245 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 ZNF214Q9UL59 606 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-201ENST00000314191 ACO1P21399 889 aaKnown RBP6.49□□□□□ -1.37
PRKDC-201ENST00000314191 USP50Q70EL3 339 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-201ENST00000314191 EXD1Q8NHP7 514 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 MFSD14AQ96MC6 490 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 USP2O75604 605 aaPredicted RBP6.49□□□□□ -1.37
PRKDC-201ENST00000314191 ZSCAN5DPP0CG00 497 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 KCNA2P16389 499 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 SV2CQ496J9 727 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 CAVIN3Q969G5 261 aa6.49□□□□□ -1.37
PRKDC-201ENST00000314191 SLC13A1Q9BZW2 595 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms