RNA–Protein interactions for RNA: ENST00000313663.11

C2CD3-201, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C2CD3, Length 6,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-201ENST00000313663 ZC4H2Q9NQZ6 224 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 SPATS2LQ9NUQ6 558 aaKnown RBP9.32□□□□□ -0.92
C2CD3-201ENST00000313663 FAM49BQ9NUQ9 324 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 UBQLN1Q9UMX0 589 aaKnown RBP9.32□□□□□ -0.92
C2CD3-201ENST00000313663 SUPT20HL2P0C7V6 817 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 TAF6P49848 677 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 USP10Q14694 798 aaKnown RBP9.32□□□□□ -0.92
C2CD3-201ENST00000313663 GRIK5Q16478 980 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 SNRNP35Q16560 246 aaKnown RBP9.32□□□□□ -0.92
C2CD3-201ENST00000313663 C10orf120Q5SQS8 335 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 KCTD17Q8N5Z5 321 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 BRD8Q9H0E9 1235 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.32□□□□□ -0.92
C2CD3-201ENST00000313663 FBXL5Q9UKA1 691 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 VPS9D1Q9Y2B5 631 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 CCDC195A0A1B0GUA6 201 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 DYTNA2CJ06 578 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 FAM200BP0CF97 657 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 CYP2C8P10632 490 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 AGBL3Q8NEM8 1001 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 USP33Q8TEY7 942 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 OSBPL9Q96SU4 736 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 MLXIPLQ9NP71 852 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 CRLS1Q9UJA2 301 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 TRAF3IP3Q9Y228 551 aa9.32□□□□□ -0.92
C2CD3-201ENST00000313663 GRID2IPA4D2P6 1211 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 RBP3P10745 1247 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 GCLCP48506 637 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 SLC11A2P49281 568 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 CLCN6P51797 869 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 BFSP2Q13515 415 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 PIGHQ14442 188 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 CCDC85BQ15834 202 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 SLC15A2Q16348 729 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 PHKG1Q16816 387 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 RCOR2Q8IZ40 523 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 HS6ST3Q8IZP7 471 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 SLC7A14Q8TBB6 771 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 DNAJC7Q99615 494 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 ZC3H7BQ9UGR2 993 aaKnown RBP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 FLT1P17948 1338 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 FAM205AQ6ZU69 1335 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 CDH16O75309 829 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 NCKAP1LP55160 1127 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 HDAC4P56524 1084 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 KIZQ2M2Z5 673 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 CCDC157Q569K6 752 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 PRAMEF18Q5VWM3 479 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 ARHGAP18Q8N392 663 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 GRAMD1AQ96CP6 724 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 ATG4CQ96DT6 458 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 NIF3L1Q9GZT8 377 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 TAF1DQ9H5J8 278 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 HEATR9A2RTY3 570 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 UBXN8O00124 270 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 EIF3DO15371 548 aaKnown RBP eCLIP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 SLC16A3O15427 465 aaKnown RBP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 SSTR3P32745 418 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 SPRP35270 261 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 NPEPPSP55786 919 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 DCAF6Q58WW2 860 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 BBS7Q8IWZ6 715 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 FMR1NBQ8N0W7 255 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 PCSK9Q8NBP7 692 aaKnown RBP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 STK33Q9BYT3 514 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 APEX2Q9UBZ4 518 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 TIAM2Q8IVF5 1701 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 GPR75-ASB3A0A0A6YYF3 556 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 EEF2KO00418 725 aaKnown RBP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 RNASEH1O60930 286 aaKnown RBP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 DMC1Q14565 340 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 EFCAB12Q6NXP0 572 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 TRAPPC11Q7Z392 1133 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 FAM161BQ96MY7 647 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 SENP7Q9BQF6 1050 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 RTFDC1Q9BY42 306 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 ANKEF1Q9NU02 776 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 SPACA6W5XKT8 324 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 ESYT3A0FGR9 886 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 EPHB2P29323 1055 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 SERPINB9P50453 376 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 EDRF1Q3B7T1 1238 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 LRRC8EQ6NSJ5 796 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 PLEKHM3Q6ZWE6 761 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 ILDR1Q86SU0 546 aaPredicted RBP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 ERO1BQ86YB8 467 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 NT5DC4Q86YG4 428 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 AGR3Q8TD06 166 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 TARS2Q9BW92 718 aaKnown RBP9.31□□□□□ -0.92
C2CD3-201ENST00000313663 KLHL11Q9NVR0 708 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 IPPQ9Y573 584 aa9.31□□□□□ -0.92
C2CD3-201ENST00000313663 A0A1B0GUL6 1792 aa9.3□□□□□ -0.92
C2CD3-201ENST00000313663 MAN1A2O60476 641 aa9.3□□□□□ -0.92
C2CD3-201ENST00000313663 ATP1A1P05023 1023 aaKnown RBP9.3□□□□□ -0.92
C2CD3-201ENST00000313663 KRT16P08779 473 aa9.3□□□□□ -0.92
C2CD3-201ENST00000313663 HIST2H2ACQ16777 129 aaPredicted RBP9.3□□□□□ -0.92
C2CD3-201ENST00000313663 BOLA3Q53S33 107 aa9.3□□□□□ -0.92
C2CD3-201ENST00000313663 HIST2H2AA3Q6FI13 130 aa9.3□□□□□ -0.92
C2CD3-201ENST00000313663 CDC42EP5Q6NZY7 148 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms