RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 URODP06132 367 aa19.39■□□□□ 0.7
HMGA1-201ENST00000311487 SPATA31D3P0C874 917 aa19.39■□□□□ 0.7
HMGA1-201ENST00000311487 ACO1P21399 889 aaKnown RBP19.39■□□□□ 0.7
HMGA1-201ENST00000311487 ELAVL2Q12926 359 aaKnown RBP19.39■□□□□ 0.7
HMGA1-201ENST00000311487 SPECC1LQ69YQ0 1117 aa19.39■□□□□ 0.7
HMGA1-201ENST00000311487 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.39■□□□□ 0.7
HMGA1-201ENST00000311487 SPATA31D4Q6ZUB0 917 aa19.39■□□□□ 0.7
HMGA1-201ENST00000311487 CACNA2D4Q7Z3S7 1137 aa19.39■□□□□ 0.7
HMGA1-201ENST00000311487 PGLYRP2Q96PD5 576 aa19.39■□□□□ 0.7
HMGA1-201ENST00000311487 NAA15Q9BXJ9 866 aaKnown RBP19.39■□□□□ 0.7
HMGA1-201ENST00000311487 ELOVL4Q9GZR5 314 aa19.39■□□□□ 0.7
HMGA1-201ENST00000311487 PLCB1Q9NQ66 1216 aa19.39■□□□□ 0.7
HMGA1-201ENST00000311487 CDY1Q9Y6F8 540 aa19.39■□□□□ 0.7
HMGA1-201ENST00000311487 LPXNO60711 386 aa19.39■□□□□ 0.69
HMGA1-201ENST00000311487 GYPCP04921 128 aa19.39■□□□□ 0.69
HMGA1-201ENST00000311487 RB1P06400 928 aa19.39■□□□□ 0.69
HMGA1-201ENST00000311487 CASP14P31944 242 aa19.39■□□□□ 0.69
HMGA1-201ENST00000311487 PSMD5Q16401 504 aa19.39■□□□□ 0.69
HMGA1-201ENST00000311487 LIMS2Q7Z4I7 341 aa19.39■□□□□ 0.69
HMGA1-201ENST00000311487 LRRTM3Q86VH5 581 aa19.39■□□□□ 0.69
HMGA1-201ENST00000311487 PALB2Q86YC2 1186 aa19.39■□□□□ 0.69
HMGA1-201ENST00000311487 MRPL17Q9NRX2 175 aaKnown RBP19.39■□□□□ 0.69
HMGA1-201ENST00000311487 FBXL5Q9UKA1 691 aa19.39■□□□□ 0.69
HMGA1-201ENST00000311487 STXBP5LQ9Y2K9 1186 aa19.39■□□□□ 0.69
HMGA1-201ENST00000311487 SYN3O14994 580 aa19.38■□□□□ 0.69
HMGA1-201ENST00000311487 TBXAS1P24557 533 aaPredicted RBP19.38■□□□□ 0.69
HMGA1-201ENST00000311487 OR1D2P34982 312 aa19.38■□□□□ 0.69
HMGA1-201ENST00000311487 FXR1P51114 621 aaKnown RBP eCLIP19.38■□□□□ 0.69
HMGA1-201ENST00000311487 ADKP55263 362 aaKnown RBP19.38■□□□□ 0.69
HMGA1-201ENST00000311487 DSG1Q02413 1049 aa19.38■□□□□ 0.69
HMGA1-201ENST00000311487 GCNT1Q02742 428 aa19.38■□□□□ 0.69
HMGA1-201ENST00000311487 PTPN14Q15678 1187 aa19.38■□□□□ 0.69
HMGA1-201ENST00000311487 KIAA1524Q8TCG1 905 aa19.38■□□□□ 0.69
HMGA1-201ENST00000311487 SPAG5Q96R06 1193 aa19.38■□□□□ 0.69
HMGA1-201ENST00000311487 HERC2P3Q9BVR0 1158 aa19.38■□□□□ 0.69
HMGA1-201ENST00000311487 RHOBTB2Q9BYZ6 727 aa19.38■□□□□ 0.69
HMGA1-201ENST00000311487 FAM49BQ9NUQ9 324 aa19.38■□□□□ 0.69
HMGA1-201ENST00000311487 GTF3C4Q9UKN8 822 aa19.38■□□□□ 0.69
HMGA1-201ENST00000311487 MYBPHLA2RUH7 354 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 GABRDO14764 452 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 CYP26A1O43174 497 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 CILPO75339 1184 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 TACC1O75410 805 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 GFPT2O94808 682 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 CYP11A1P05108 521 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 CTSAP10619 480 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 WARSP23381 471 aaKnown RBP19.37■□□□□ 0.69
HMGA1-201ENST00000311487 ADGRD2Q7Z7M1 963 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 C17orf53Q8N3J3 647 aaPredicted RBP19.37■□□□□ 0.69
HMGA1-201ENST00000311487 HEXIM2Q96MH2 286 aaKnown RBP19.37■□□□□ 0.69
HMGA1-201ENST00000311487 SAMD11Q96NU1 681 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 CLSTN3Q9BQT9 956 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 TMLHEQ9NVH6 421 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 BARX2Q9UMQ3 279 aaPredicted RBP19.37■□□□□ 0.69
HMGA1-201ENST00000311487 LRRC53A6NM62 1247 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 OAZ2O95190 189 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 CNPP09543 421 aaKnown RBP19.37■□□□□ 0.69
HMGA1-201ENST00000311487 TYMPP19971 482 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 RAD23BP54727 409 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 RBM10P98175 930 aaKnown RBP19.37■□□□□ 0.69
HMGA1-201ENST00000311487 HABP4Q5JVS0 413 aaKnown RBP19.37■□□□□ 0.69
HMGA1-201ENST00000311487 THEM5Q8N1Q8 247 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 TMEM86AQ8N2M4 240 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 RBBP8NLQ8NC74 664 aaPredicted RBP19.37■□□□□ 0.69
HMGA1-201ENST00000311487 TTYH3Q9C0H2 523 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 CRTAC1Q9NQ79 661 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 DSEQ9UL01 958 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 TSC2P49815 1807 aa19.37■□□□□ 0.69
HMGA1-201ENST00000311487 C2orf71A6NGG8 1288 aa19.36■□□□□ 0.69
HMGA1-201ENST00000311487 F8VZ95 297 aa19.36■□□□□ 0.69
HMGA1-201ENST00000311487 CLDN5O00501 218 aa19.36■□□□□ 0.69
HMGA1-201ENST00000311487 TEX28O15482 410 aa19.36■□□□□ 0.69
HMGA1-201ENST00000311487 GTF2F1P35269 517 aaKnown RBP eCLIP19.36■□□□□ 0.69
HMGA1-201ENST00000311487 MRPL58Q14197 206 aaKnown RBP19.36■□□□□ 0.69
HMGA1-201ENST00000311487 SLC39A12Q504Y0 691 aa19.36■□□□□ 0.69
HMGA1-201ENST00000311487 MDH1BQ5I0G3 518 aa19.36■□□□□ 0.69
HMGA1-201ENST00000311487 E4F1Q66K89 784 aaPredicted RBP19.36■□□□□ 0.69
HMGA1-201ENST00000311487 ANKS3Q6ZW76 656 aa19.36■□□□□ 0.69
HMGA1-201ENST00000311487 SLC47A2Q86VL8 602 aa19.36■□□□□ 0.69
HMGA1-201ENST00000311487 UBR7Q8N806 425 aa19.36■□□□□ 0.69
HMGA1-201ENST00000311487 SLC4A11Q8NBS3 891 aa19.36■□□□□ 0.69
HMGA1-201ENST00000311487 BAP1Q92560 729 aa19.36■□□□□ 0.69
HMGA1-201ENST00000311487 STK33Q9BYT3 514 aa19.36■□□□□ 0.69
HMGA1-201ENST00000311487 CYP3A43Q9HB55 503 aa19.36■□□□□ 0.69
HMGA1-201ENST00000311487 CEP72Q9P209 647 aa19.36■□□□□ 0.69
HMGA1-201ENST00000311487 CCDC130P13994 396 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 CPB1P15086 417 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 LHX1P48742 406 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 ZNF280DQ6N043 979 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 MRPL43Q8N983 215 aaKnown RBP19.35■□□□□ 0.69
HMGA1-201ENST00000311487 PIK3R5Q8WYR1 880 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 SHC3Q92529 594 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 SYT15Q9BQS2 421 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 NT5C1AQ9BXI3 368 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 SPTLC3Q9NUV7 552 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 C5orf42Q9H799 3197 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 PRRC2BQ5JSZ5 2229 aaKnown RBP19.35■□□□□ 0.69
HMGA1-201ENST00000311487 LILRB3O75022 631 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 CD19P15391 556 aa19.35■□□□□ 0.69
HMGA1-201ENST00000311487 IGFBP4P22692 258 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms