RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ARL4AP40617 200 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 ALDH5A1P51649 535 aaPredicted RBP5.4□□□□□ -1.54
CKS1B-201ENST00000308987 STAT2P52630 851 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 HAND2P61296 217 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 PPARAQ07869 468 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 CAMK2GQ13555 558 aaPredicted RBP5.4□□□□□ -1.54
CKS1B-201ENST00000308987 CBX2Q14781 532 aaPredicted RBP5.4□□□□□ -1.54
CKS1B-201ENST00000308987 BRD3Q15059 726 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 POSTNQ15063 836 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 ERCC6LQ2NKX8 1250 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 TKFCQ3LXA3 575 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 ARHGAP29Q52LW3 1261 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 RCSD1Q6JBY9 416 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 GALNT18Q6P9A2 607 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 NSMFQ6X4W1 530 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 SLC30A10Q6XR72 485 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 RSRC2Q7L4I2 434 aaKnown RBP5.4□□□□□ -1.54
CKS1B-201ENST00000308987 LSRQ86X29 649 aaPredicted RBP5.4□□□□□ -1.54
CKS1B-201ENST00000308987 RELL1Q8IUW5 271 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 SLFN12Q8IYM2 578 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 RPUSD2Q8IZ73 545 aaKnown RBP5.4□□□□□ -1.54
CKS1B-201ENST00000308987 ZNF444Q8N0Y2 327 aaPredicted RBP5.4□□□□□ -1.54
CKS1B-201ENST00000308987 CHURC1Q8WUH1 139 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 HNRNPLLQ8WVV9 542 aaKnown RBP5.4□□□□□ -1.54
CKS1B-201ENST00000308987 ARNTL2Q8WYA1 636 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 SMARCE1Q969G3 411 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 FAM122AQ96E09 287 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 TCTN2Q96GX1 697 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 BAG1Q99933 345 aaPredicted RBP5.4□□□□□ -1.54
CKS1B-201ENST00000308987 SPATA25Q9BR10 227 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 MENTQ9BUN1 341 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 HDAC8Q9BY41 377 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 WDR11Q9BZH6 1224 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 AP5M1Q9H0R1 490 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 TSPYL1Q9H0U9 437 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 RANBP17Q9H2T7 1088 aaKnown RBP5.4□□□□□ -1.54
CKS1B-201ENST00000308987 RNF41Q9H4P4 317 aaPredicted RBP5.4□□□□□ -1.54
CKS1B-201ENST00000308987 LY9Q9HBG7 655 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 VTA1Q9NP79 307 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 ZNF446Q9NWS9 450 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 PSD3Q9NYI0 1048 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 MYO1AQ9UBC5 1043 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 SYNPO2Q9UMS6 1093 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 PPP2R2CQ9Y2T4 447 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 Q9Y3F1 56 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 DUSP10Q9Y6W6 482 aa5.4□□□□□ -1.54
CKS1B-201ENST00000308987 WDR81Q562E7 1941 aa5.4□□□□□ -1.55
CKS1B-201ENST00000308987 PTPRZ1P23471 2315 aaPredicted RBP5.4□□□□□ -1.55
CKS1B-201ENST00000308987 TTC3P53804 2025 aa5.4□□□□□ -1.55
CKS1B-201ENST00000308987 A0A1W2PQC6 194 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 CCDC151A5D8V7 595 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 C1QTNF3-AMACRE9PGA6 284 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 IFIT3O14879 490 aaKnown RBP5.39□□□□□ -1.55
CKS1B-201ENST00000308987 URI1O94763 535 aaPredicted RBP5.39□□□□□ -1.55
CKS1B-201ENST00000308987 HTR3BO95264 441 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 ICAM1P05362 532 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 MYL3P08590 195 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 FGRP09769 529 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 TSPY3P0CV98 308 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 TSPY8P0CW00 308 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 PCP11498 1178 aaKnown RBP5.39□□□□□ -1.55
CKS1B-201ENST00000308987 ATP1A3P13637 1013 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 XBP1P17861 261 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 EDNRBP24530 442 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 MARCKSP29966 332 aaPredicted RBP5.39□□□□□ -1.55
CKS1B-201ENST00000308987 CASQ1P31415 396 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 SLC1A4P43007 532 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 TDO2P48775 406 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 RNF4P78317 190 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 DEFB103AP81534 67 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 SPAG1Q07617 926 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 GPS2Q13227 327 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 PNOCQ13519 176 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 LAPTM5Q13571 262 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 TRIM14Q14142 442 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 NR1I3Q14994 352 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 LONRF3Q496Y0 759 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 HSF5Q4G112 596 aaPredicted RBP5.39□□□□□ -1.55
CKS1B-201ENST00000308987 VWA3BQ502W6 1294 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 TMEM201Q5SNT2 666 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 SPATA1Q5VX52 437 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 CCDC62Q6P9F0 684 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 BTNL9Q6UXG8 535 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 LIPIQ6XZB0 460 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 CYB5R4Q7L1T6 521 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 FAM160B2Q86V87 743 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 TBC1D10CQ8IV04 446 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 HERC6Q8IVU3 1022 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 TXLNBQ8N3L3 684 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 CEP112Q8N8E3 955 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 TC2NQ8N9U0 490 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 DAGLBQ8NCG7 672 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 PHC3Q8NDX5 983 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 GDPD5Q8WTR4 605 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 GATAD2BQ8WXI9 593 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 DDX1Q92499 740 aaKnown RBP5.39□□□□□ -1.55
CKS1B-201ENST00000308987 TBC1D5Q92609 795 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 ANKS1AQ92625 1134 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 GOLGA1Q92805 767 aa5.39□□□□□ -1.55
CKS1B-201ENST00000308987 KAT2BQ92831 832 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms