RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 STARD13Q9Y3M8 1113 aa17.48■□□□□ 0.39
SSH3-201ENST00000308127 DOCK5Q9H7D0 1870 aa17.48■□□□□ 0.39
SSH3-201ENST00000308127 MYH9P35579 1960 aaKnown RBP17.48■□□□□ 0.39
SSH3-201ENST00000308127 EME2A4GXA9 379 aaPredicted RBP17.47■□□□□ 0.39
SSH3-201ENST00000308127 PMM2O15305 246 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 GCLCP48506 637 aaPredicted RBP17.47■□□□□ 0.39
SSH3-201ENST00000308127 MTMR2Q13614 643 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 TAF5Q15542 800 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 PDK4Q16654 411 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 NBPF20Q3BBV1 942 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 DSTYKQ6XUX3 929 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 TTC7BQ86TV6 843 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 RAB3IPQ96QF0 476 aaPredicted RBP17.47■□□□□ 0.39
SSH3-201ENST00000308127 LRMDAQ9H2I8 198 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 RNPEPL1Q9HAU8 725 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 MRPL47Q9HD33 250 aaKnown RBP17.47■□□□□ 0.39
SSH3-201ENST00000308127 LYPLA2O95372 231 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 CTCFP49711 727 aaPredicted RBP17.47■□□□□ 0.39
SSH3-201ENST00000308127 YARSP54577 528 aaKnown RBP17.47■□□□□ 0.39
SSH3-201ENST00000308127 OSTNP61366 133 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 PLEKHA7Q6IQ23 1121 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 C15orf39Q6ZRI6 1047 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 C3orf62Q6ZUJ4 267 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 USP37Q86T82 979 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 ARMCX1Q9P291 453 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 KANSL3Q9P2N6 904 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 AGTPBP1Q9UPW5 1226 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 CHMP2BQ9UQN3 213 aa17.47■□□□□ 0.39
SSH3-201ENST00000308127 CCDC189A1A4V9 331 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 TPBGLP0DKB5 382 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 EAPPQ56P03 285 aaPredicted RBP17.46■□□□□ 0.39
SSH3-201ENST00000308127 RNASEH2BQ5TBB1 312 aaKnown RBP17.46■□□□□ 0.39
SSH3-201ENST00000308127 DNAJC24Q6P3W2 148 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 ASAP3Q8TDY4 903 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 PYROXD1Q8WU10 500 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 FAM81BQ96LP2 452 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 MSTO1Q9BUK6 570 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 SMNDC1O75940 238 aaKnown RBP eCLIP17.46■□□□□ 0.39
SSH3-201ENST00000308127 EGFRP00533 1210 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 JAK3P52333 1124 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 OTUD4Q01804 1114 aaKnown RBP17.46■□□□□ 0.39
SSH3-201ENST00000308127 ACVR2BQ13705 512 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 SMAD1Q15797 465 aaKnown RBP17.46■□□□□ 0.39
SSH3-201ENST00000308127 HIF1AQ16665 826 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 KHDC1Q4VXA5 237 aaKnown RBP17.46■□□□□ 0.39
SSH3-201ENST00000308127 DPH6Q7L8W6 267 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 MCF2L2Q86YR7 1114 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 BBOF1Q8ND07 529 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 FBXO36Q8NEA4 188 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 ACTL9Q8TC94 416 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 TTC17Q96AE7 1141 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 PAFAH2Q99487 392 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 ANKEF1Q9NU02 776 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 PARVAQ9NVD7 372 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 ARL8BQ9NVJ2 186 aa17.46■□□□□ 0.39
SSH3-201ENST00000308127 THSD7AQ9UPZ6 1657 aa17.46■□□□□ 0.38
SSH3-201ENST00000308127 EXTL3O43909 919 aa17.46■□□□□ 0.38
SSH3-201ENST00000308127 TYROBPO43914 113 aa17.46■□□□□ 0.38
SSH3-201ENST00000308127 AVILO75366 819 aa17.46■□□□□ 0.38
SSH3-201ENST00000308127 FAM155BO75949 473 aa17.46■□□□□ 0.38
SSH3-201ENST00000308127 RGS20O76081 388 aa17.46■□□□□ 0.38
SSH3-201ENST00000308127 TJP3O95049 919 aa17.46■□□□□ 0.38
SSH3-201ENST00000308127 NR3C2P08235 984 aa17.46■□□□□ 0.38
SSH3-201ENST00000308127 CALB2P22676 271 aa17.46■□□□□ 0.38
SSH3-201ENST00000308127 ALDH3A1P30838 453 aa17.46■□□□□ 0.38
SSH3-201ENST00000308127 PTDSS1P48651 473 aaKnown RBP17.46■□□□□ 0.38
SSH3-201ENST00000308127 KRT76Q01546 638 aa17.46■□□□□ 0.38
SSH3-201ENST00000308127 NR1H3Q13133 447 aa17.46■□□□□ 0.38
SSH3-201ENST00000308127 CYP26B1Q9NR63 512 aa17.46■□□□□ 0.38
SSH3-201ENST00000308127 HEY2Q9UBP5 337 aa17.46■□□□□ 0.38
SSH3-201ENST00000308127 BASP1P80723 227 aaKnown RBP17.45■□□□□ 0.38
SSH3-201ENST00000308127 NCOA4Q13772 614 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 PRAMEF18Q5VWM3 479 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 GPAT2Q6NUI2 795 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 RSBN1LQ6PCB5 846 aaPredicted RBP17.45■□□□□ 0.38
SSH3-201ENST00000308127 CENPUQ71F23 418 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 IGDCC3Q8IVU1 814 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 LARGE2Q8N3Y3 721 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 SAMD3Q8N6K7 520 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 CNKSR1Q969H4 720 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 GRAMD1AQ96CP6 724 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 TRIM11Q96F44 468 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 TCHPQ9BT92 498 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 SLC38A10Q9HBR0 1119 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 RNF146Q9NTX7 359 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 CYP39A1Q9NYL5 469 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 PSMC3IPQ9P2W1 217 aaPredicted RBP17.45■□□□□ 0.38
SSH3-201ENST00000308127 CENPFP49454 3210 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 hCG_1818297A0A087WSY0 165 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 CST8O60676 142 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 TMEM63AO94886 807 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 VCPP55072 806 aaKnown RBP17.45■□□□□ 0.38
SSH3-201ENST00000308127 FSTL1Q12841 308 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 JOSD2Q8TAC2 188 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 STK32AQ8WU08 396 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 AKT1S1Q96B36 256 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 MTMR12Q9C0I1 747 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 ZNF395Q9H8N7 513 aaPredicted RBP17.45■□□□□ 0.38
SSH3-201ENST00000308127 RABGEF1Q9UJ41 708 aa17.45■□□□□ 0.38
SSH3-201ENST00000308127 TMEM191CA6NGB0 347 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms