RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 PSMC6P62333 389 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 MRPS6P82932 125 aaKnown RBP11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 APBA1Q02410 837 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 GRB10Q13322 594 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 LAMB3Q13751 1172 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 OOSP2Q86WS3 158 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 RNF10Q8N5U6 811 aaKnown RBP11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 ZNF558Q96NG5 402 aa11.21□□□□□ -0.61
SYNPO2-201ENST00000307142 CCDC195A0A1B0GUA6 201 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 BTBD19C9JJ37 291 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 EPHB2P29323 1055 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 PPP3CCP48454 512 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 CRLF3Q8IUI8 442 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 TRIM59Q8IWR1 403 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 CCNYL1Q8N7R7 359 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 CYP2W1Q8TAV3 490 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 SPDL1Q96EA4 605 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 FAM163AQ96GL9 167 aaPredicted RBP11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 MRIQ9BWK5 157 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 MFSD4BQ5TF39 518 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 GJB7Q6PEY0 223 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 ZBED8Q8IZ13 594 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 ADSSL1Q8N142 457 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 SNF8Q96H20 258 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 CYP39A1Q9NYL5 469 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 ITGA11Q9UKX5 1188 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 CAPN11Q9UMQ6 739 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 FHOD1Q9Y613 1164 aa11.21□□□□□ -0.62
SYNPO2-201ENST00000307142 CCDC151A5D8V7 595 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 KPNA7A9QM74 516 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 KITP10721 976 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 SLC9A1P19634 815 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 CCT5P48643 541 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 BCAT1P54687 386 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 STARD3Q14849 445 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 TBCCQ15814 346 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 USP49Q70CQ1 688 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 CHD2O14647 1828 aaKnown RBP11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 ATMINO43313 823 aaPredicted RBP11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 ANKRD23Q86SG2 305 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 SLAIN1Q8ND83 568 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 PPWD1Q96BP3 646 aaKnown RBP11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 PURBQ96QR8 312 aaKnown RBP11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 VPS28Q9UK41 221 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 IFNA8P32881 189 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 KLHL38Q2WGJ6 581 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 CBWD2Q8IUF1 395 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 C1orf131Q8NDD1 294 aaKnown RBP11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 WHAMMQ8TF30 809 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 LZICQ8WZA0 190 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 RABGGTAQ92696 567 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 PPP1R2P1Q96PQ5 205 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 A0A1W2PQC6 194 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 SUN1O94901 812 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 PRKCQQ04759 706 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 PDK1Q15118 436 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 NFE2Q16621 373 aaPredicted RBP11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 LATS2Q9NRM7 1088 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 RAB23Q9ULC3 237 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 TMEM150BA6NC51 233 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 C6orf118Q5T5N4 469 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 RSRC1Q96IZ7 334 aaKnown RBP11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 HIPK3Q9H422 1215 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 CSE1LP55060 971 aaKnown RBP11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 ZNF677Q86XU0 584 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 WDR49Q8IV35 697 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 NCLNQ969V3 563 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 SPATA16Q9BXB7 569 aa11.2□□□□□ -0.62
SYNPO2-201ENST00000307142 PIK3C2AO00443 1686 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 USP2O75604 605 aaPredicted RBP11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 TMPRSS15P98073 1019 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 SEC23AQ15436 765 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 SLC39A12Q504Y0 691 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 TRAPPC11Q7Z392 1133 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 ZNF513Q8N8E2 541 aaPredicted RBP11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 KLRG1Q96E93 195 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 ELMO2Q96JJ3 720 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 OSBPL9Q96SU4 736 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 CGRRF1Q99675 332 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 GFAPP14136 432 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 GARTP22102 1010 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 GIT2Q14161 759 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 P3H1Q32P28 736 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 C15orf52Q6ZUT6 534 aaKnown RBP11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 GAS2L3Q86XJ1 694 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 TEKT4Q8WW24 435 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 XPO6Q96QU8 1125 aaKnown RBP11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 CBWD1Q9BRT8 395 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 UXTQ9UBK9 157 aaPredicted RBP11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 COL3A1P02461 1466 aaPredicted RBP11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 CFAP99D6REC4 459 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 KDM1AO60341 852 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 TSPAN3O60637 253 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 MLH1P40692 756 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 ARHGAP25P42331 645 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 ADCY2Q08462 1091 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 TMCO4Q5TGY1 634 aa11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 TRIM45Q9H8W5 580 aaPredicted RBP11.19□□□□□ -0.62
SYNPO2-201ENST00000307142 RAB6BQ9NRW1 208 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms