RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 ITIH2P19823 946 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 SERPINB6P35237 376 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 ITIH4Q14624 930 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 RSPH3Q86UC2 560 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 DAW1Q8N136 415 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 RFWD2Q8NHY2 731 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 PPP1R13LQ8WUF5 828 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 PRR11Q96HE9 360 aaPredicted RBP15.35■□□□□ 0.05
PTPN9-201ENST00000306726 TMX2Q9Y320 296 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 FIS1Q9Y3D6 152 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 DPPA5A6NC42 116 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 USP1O94782 785 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 HSPA6P17066 643 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 ARFIP2P53365 341 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 TRMT10CQ7L0Y3 403 aaKnown RBP15.35■□□□□ 0.05
PTPN9-201ENST00000306726 PIGWQ7Z7B1 504 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 C2orf69Q8N8R5 385 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 DEPTORQ8TB45 409 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 DNAJC9Q8WXX5 260 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 ACAP3Q96P50 834 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 TRIM56Q9BRZ2 755 aaKnown RBP15.35■□□□□ 0.05
PTPN9-201ENST00000306726 RXFP1Q9HBX9 757 aa15.35■□□□□ 0.05
PTPN9-201ENST00000306726 UMODL1Q5DID0 1318 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 ADM5C9JUS6 153 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 HLA-DRAP01903 254 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 TAC1P20366 129 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 MAN1A1P33908 653 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 SERPINB4P48594 390 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 SEMA3FQ13275 785 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 SMC1BQ8NDV3 1235 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 TCP10LQ8TDR4 215 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 CKAP2Q8WWK9 683 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 DCLK3Q9C098 648 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 GPR88Q9GZN0 384 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 GPATCH2LQ9NWQ4 482 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 NR2E3Q9Y5X4 410 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 A0A0A6YYK5 440 aaPredicted RBP15.34■□□□□ 0.05
PTPN9-201ENST00000306726 P4HBP07237 508 aaKnown RBP15.34■□□□□ 0.05
PTPN9-201ENST00000306726 NUDT17P0C025 328 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 PSMA2P25787 234 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 NPTX2P47972 431 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 POU5F1Q01860 360 aaKnown RBP15.34■□□□□ 0.05
PTPN9-201ENST00000306726 BTKQ06187 659 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 MGAT5Q09328 741 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 ZBTB41Q5SVQ8 909 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 DSTYKQ6XUX3 929 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 TRIM4Q9C037 500 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 SEPT10Q9P0V9 454 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.34■□□□□ 0.05
PTPN9-201ENST00000306726 B2RBV5 119 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 CLGNO14967 610 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 CST8O60676 142 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 PLA2G6O60733 806 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 FDX1P10109 184 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 SOX11P35716 441 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 RARRES1P49788 294 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 SCARA3Q6AZY7 606 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 DARS2Q6PI48 645 aaKnown RBP15.34■□□□□ 0.05
PTPN9-201ENST00000306726 FAM13CQ8NE31 585 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 TEKT4Q8WW24 435 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.34■□□□□ 0.053e-14■■■■■ 116.1
PTPN9-201ENST00000306726 ART4Q93070 314 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 KIAA1586Q9HCI6 787 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 PCDHA3Q9Y5H8 950 aa15.34■□□□□ 0.05
PTPN9-201ENST00000306726 LPXNO60711 386 aa15.33■□□□□ 0.05
PTPN9-201ENST00000306726 NCF2P19878 526 aaPredicted RBP15.33■□□□□ 0.05
PTPN9-201ENST00000306726 CALRP27797 417 aaKnown RBP15.33■□□□□ 0.05
PTPN9-201ENST00000306726 PTDSS1P48651 473 aaKnown RBP15.33■□□□□ 0.05
PTPN9-201ENST00000306726 TTLL12Q14166 644 aaPredicted RBP15.33■□□□□ 0.05
PTPN9-201ENST00000306726 ACAD10Q6JQN1 1059 aa15.33■□□□□ 0.05
PTPN9-201ENST00000306726 ARID3BQ8IVW6 561 aaPredicted RBP15.33■□□□□ 0.05
PTPN9-201ENST00000306726 CEP41Q9BYV8 373 aa15.33■□□□□ 0.05
PTPN9-201ENST00000306726 OLFML3Q9NRN5 406 aa15.33■□□□□ 0.05
PTPN9-201ENST00000306726 CHKBQ9Y259 395 aa15.33■□□□□ 0.05
PTPN9-201ENST00000306726 ATAD5Q96QE3 1844 aa15.33■□□□□ 0.05
PTPN9-201ENST00000306726 SSC5DA1L4H1 1573 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 CENPFP49454 3210 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 ZMYM2Q9UBW7 1377 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 CFLARO15519 480 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 ZMPSTE24O75844 475 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 SNHG28P0DPA3 235 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 GTF2H1P32780 548 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 MSX2P35548 267 aaPredicted RBP15.33■□□□□ 0.04
PTPN9-201ENST00000306726 ORC2Q13416 577 aaPredicted RBP15.33■□□□□ 0.04
PTPN9-201ENST00000306726 CENPUQ71F23 418 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 FAM160B2Q86V87 743 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 RHOT1Q8IXI2 618 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 KCTD6Q8NC69 237 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 NGRNQ9NPE2 291 aaKnown RBP15.33■□□□□ 0.04
PTPN9-201ENST00000306726 AAASQ9NRG9 546 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 EXOC7Q9UPT5 735 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 TRPA1O75762 1119 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 ABCG1P45844 678 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 RAP1GAPP47736 663 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 PEX5P50542 639 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 NFX1Q12986 1120 aaKnown RBP15.33■□□□□ 0.04
PTPN9-201ENST00000306726 HIF1AQ16665 826 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 SIAH1Q8IUQ4 282 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 SERPINB12Q96P63 405 aa15.33■□□□□ 0.04
PTPN9-201ENST00000306726 POLR3CQ9BUI4 534 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms