RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 NOMO2Q5JPE7 1267 aa18.62■□□□□ 0.57
KRT28-201ENST00000306658 MON1BQ7L1V2 547 aa18.62■□□□□ 0.57
KRT28-201ENST00000306658 NECAB2Q7Z6G3 386 aa18.62■□□□□ 0.57
KRT28-201ENST00000306658 ADGRF2Q8IZF7 708 aa18.62■□□□□ 0.57
KRT28-201ENST00000306658 AVENQ9NQS1 362 aaPredicted RBP18.62■□□□□ 0.57
KRT28-201ENST00000306658 TBX21Q9UL17 535 aa18.62■□□□□ 0.57
KRT28-201ENST00000306658 L1RE1Q9UN81 338 aa18.62■□□□□ 0.57
KRT28-201ENST00000306658 MRFAP1Q9Y605 127 aa18.62■□□□□ 0.57
KRT28-201ENST00000306658 SAR1BQ9Y6B6 198 aa18.62■□□□□ 0.57
KRT28-201ENST00000306658 MTA2O94776 668 aa18.61■□□□□ 0.57
KRT28-201ENST00000306658 WARSP23381 471 aaKnown RBP18.61■□□□□ 0.57
KRT28-201ENST00000306658 TERF1P54274 439 aa18.61■□□□□ 0.57
KRT28-201ENST00000306658 DSTYKQ6XUX3 929 aa18.61■□□□□ 0.57
KRT28-201ENST00000306658 DAAM2Q86T65 1068 aa18.61■□□□□ 0.57
KRT28-201ENST00000306658 LRRC57Q8N9N7 239 aa18.61■□□□□ 0.57
KRT28-201ENST00000306658 KBTBD7Q8WVZ9 684 aa18.61■□□□□ 0.57
KRT28-201ENST00000306658 SENP8Q96LD8 212 aa18.61■□□□□ 0.57
KRT28-201ENST00000306658 CDC23Q9UJX2 597 aa18.61■□□□□ 0.57
KRT28-201ENST00000306658 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.61■□□□□ 0.57
KRT28-201ENST00000306658 TANC1Q9C0D5 1861 aa18.61■□□□□ 0.57
KRT28-201ENST00000306658 O00370 1275 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 CALB1P05937 261 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 PRLRP16471 622 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 MMP8P22894 467 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 CLLU1OSQ5K130 101 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 ACOT1Q86TX2 421 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 ABI1Q8IZP0 508 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 CRYBG2Q8N1P7 616 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 TMEM86AQ8N2M4 240 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 PDCL2Q8N4E4 241 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 C1orf131Q8NDD1 294 aaKnown RBP18.6■□□□□ 0.57
KRT28-201ENST00000306658 TNIP3Q96KP6 325 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 C11orf70Q9BRQ4 267 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 NUP85Q9BW27 656 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 CACNG4Q9UBN1 327 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 LRFN2Q9ULH4 789 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 COG5Q9UP83 839 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 STXBP5LQ9Y2K9 1186 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 TET1Q8NFU7 2136 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 B3GAT3O94766 335 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 MICAL2O94851 1124 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 FGFR1P11362 822 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 RFC2P35250 354 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 AMPD2Q01433 879 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 RNASELQ05823 741 aaKnown RBP18.6■□□□□ 0.57
KRT28-201ENST00000306658 MEI1Q5TIA1 1274 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 DENND1BQ6P3S1 775 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 DCLRE1AQ6PJP8 1040 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 LCLAT1Q6UWP7 414 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 SLFN11Q7Z7L1 901 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 ERICH1Q86X53 443 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 WDTC1Q8N5D0 677 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 MSANTD4Q8NCY6 345 aa18.6■□□□□ 0.57
KRT28-201ENST00000306658 ZNF564Q8TBZ8 553 aaPredicted RBP18.6■□□□□ 0.57
KRT28-201ENST00000306658 MRPL47Q9HD33 250 aaKnown RBP18.6■□□□□ 0.57
KRT28-201ENST00000306658 ATMINO43313 823 aaPredicted RBP18.59■□□□□ 0.57
KRT28-201ENST00000306658 HOXA2O43364 376 aa18.59■□□□□ 0.57
KRT28-201ENST00000306658 BUB1BO60566 1050 aaPredicted RBP18.59■□□□□ 0.57
KRT28-201ENST00000306658 FTCDO95954 541 aa18.59■□□□□ 0.57
KRT28-201ENST00000306658 PDGFRBP09619 1106 aa18.59■□□□□ 0.57
KRT28-201ENST00000306658 RRM1P23921 792 aa18.59■□□□□ 0.57
KRT28-201ENST00000306658 LHX1P48742 406 aa18.59■□□□□ 0.57
KRT28-201ENST00000306658 AARSP49588 968 aaKnown RBP eCLIP18.59■□□□□ 0.57
KRT28-201ENST00000306658 LRRC26Q2I0M4 334 aa18.59■□□□□ 0.57
KRT28-201ENST00000306658 MMS22LQ6ZRQ5 1243 aa18.59■□□□□ 0.57
KRT28-201ENST00000306658 DEFB128Q7Z7B8 93 aa18.59■□□□□ 0.57
KRT28-201ENST00000306658 C3orf58Q8NDZ4 430 aa18.59■□□□□ 0.57
KRT28-201ENST00000306658 MYRIPQ8NFW9 859 aa18.59■□□□□ 0.57
KRT28-201ENST00000306658 UBE2Q2Q8WVN8 375 aa18.59■□□□□ 0.57
KRT28-201ENST00000306658 FAM193BQ96PV7 902 aaPredicted RBP18.59■□□□□ 0.57
KRT28-201ENST00000306658 PAAF1Q9BRP4 392 aa18.59■□□□□ 0.57
KRT28-201ENST00000306658 SNX12Q9UMY4 172 aa18.59■□□□□ 0.57
KRT28-201ENST00000306658 SCINQ9Y6U3 715 aa18.59■□□□□ 0.57
KRT28-201ENST00000306658 SCN5AQ14524 2016 aa18.59■□□□□ 0.57
KRT28-201ENST00000306658 ARHGEF37A1IGU5 675 aa18.58■□□□□ 0.57
KRT28-201ENST00000306658 M0QYV0 167 aa18.58■□□□□ 0.57
KRT28-201ENST00000306658 GABRDO14764 452 aa18.58■□□□□ 0.57
KRT28-201ENST00000306658 SLU7O95391 586 aaKnown RBP18.58■□□□□ 0.57
KRT28-201ENST00000306658 TCP1P17987 556 aaKnown RBP18.58■□□□□ 0.57
KRT28-201ENST00000306658 PTP4A2Q12974 167 aa18.58■□□□□ 0.57
KRT28-201ENST00000306658 WSCD1Q658N2 575 aa18.58■□□□□ 0.57
KRT28-201ENST00000306658 PEX26Q7Z412 305 aa18.58■□□□□ 0.57
KRT28-201ENST00000306658 C12orf29Q8N999 325 aa18.58■□□□□ 0.57
KRT28-201ENST00000306658 RSPH1Q8WYR4 309 aa18.58■□□□□ 0.57
KRT28-201ENST00000306658 RABGGTAQ92696 567 aa18.58■□□□□ 0.57
KRT28-201ENST00000306658 TLR10Q9BXR5 811 aa18.58■□□□□ 0.57
KRT28-201ENST00000306658 PARVAQ9NVD7 372 aa18.58■□□□□ 0.57
KRT28-201ENST00000306658 TSPAN16Q9UKR8 245 aa18.58■□□□□ 0.57
KRT28-201ENST00000306658 STRIP2Q9ULQ0 834 aa18.58■□□□□ 0.57
KRT28-201ENST00000306658 HYOU1Q9Y4L1 999 aa18.58■□□□□ 0.57
KRT28-201ENST00000306658 NME7Q9Y5B8 376 aa18.58■□□□□ 0.57
KRT28-201ENST00000306658 TTC3P53804 2025 aa18.58■□□□□ 0.56
KRT28-201ENST00000306658 ODC1P11926 461 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 LMO2P25791 158 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 DSC1Q08554 894 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 IKBKEQ14164 716 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 WHAMMP3Q1A5X7 153 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 TIGD5Q53EQ6 642 aa18.57■□□□□ 0.56
KRT28-201ENST00000306658 PPP1R26Q5T8A7 1209 aaPredicted RBP18.57■□□□□ 0.56
KRT28-201ENST00000306658 ARHGAP17Q68EM7 881 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms