RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 GOLGA2P5Q9HBQ8 144 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 DNAH12Q6ZR08 3092 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 MEIS3P2A8K0S8 358 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 MYO1FO00160 1098 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 SPOPO43791 374 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 HUS1O60921 280 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 COMTP21964 271 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 SOWAHAQ2M3V2 549 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 C2CD6Q53TS8 623 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 CCDC70Q6NSX1 233 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 DENND1BQ6P3S1 775 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 AGMOQ6ZNB7 445 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 CTU1Q7Z7A3 348 aaKnown RBP16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 WDTC1Q8N5D0 677 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 APPL2Q8NEU8 664 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 SPATA4Q8NEY3 305 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 OR6B3Q8NGW1 331 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 LPPQ93052 612 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 MS4A14Q96JA4 679 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 TSPYL2Q9H2G4 693 aaPredicted RBP16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 RSAD1Q9HA92 442 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 LCMT1Q9UIC8 334 aa16.67■□□□□ 0.26
HERPUD1-201ENST00000300302 O00370 1275 aa16.66■□□□□ 0.26
HERPUD1-201ENST00000300302 CEP104O60308 925 aa16.66■□□□□ 0.26
HERPUD1-201ENST00000300302 SLC1A1P43005 524 aa16.66■□□□□ 0.26
HERPUD1-201ENST00000300302 CDK7P50613 346 aa16.66■□□□□ 0.26
HERPUD1-201ENST00000300302 LILRA4P59901 499 aa16.66■□□□□ 0.26
HERPUD1-201ENST00000300302 MAMLD1Q13495 774 aa16.66■□□□□ 0.26
HERPUD1-201ENST00000300302 BFSP2Q13515 415 aa16.66■□□□□ 0.26
HERPUD1-201ENST00000300302 CLUL1Q15846 466 aa16.66■□□□□ 0.26
HERPUD1-201ENST00000300302 DPH6Q7L8W6 267 aa16.66■□□□□ 0.26
HERPUD1-201ENST00000300302 NOA1Q8NC60 698 aaKnown RBP16.66■□□□□ 0.26
HERPUD1-201ENST00000300302 RNF169Q8NCN4 708 aa16.66■□□□□ 0.26
HERPUD1-201ENST00000300302 GSTCDQ8NEC7 633 aa16.66■□□□□ 0.26
HERPUD1-201ENST00000300302 ACTRT1Q8TDG2 376 aa16.66■□□□□ 0.26
HERPUD1-201ENST00000300302 CARD9Q9H257 536 aa16.66■□□□□ 0.26
HERPUD1-201ENST00000300302 SNX25Q9H3E2 840 aa16.66■□□□□ 0.26
HERPUD1-201ENST00000300302 A8MXQ7 604 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 M0QYV0 167 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 DDX3YO15523 660 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 MICAL2O94851 1124 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 RPL9P32969 192 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 TAP1Q03518 808 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 TRAF7Q6Q0C0 670 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 LCLAT1Q6UWP7 414 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 TOP6BLQ8N6T0 577 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 BTBD6Q96KE9 485 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 ARGLU1Q9NWB6 273 aaPredicted RBP16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 OGDHLQ9ULD0 1010 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 CCDC66A2RUB6 948 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 PGRMC1O00264 195 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 SPTLC1O15269 473 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 TUBBP07437 444 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 FAM163BP0C2L3 166 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 SELPP16109 830 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 GNL1P36915 607 aaPredicted RBP16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 RBM10P98175 930 aaKnown RBP16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 C2orf54Q08AI8 447 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 DNAJC24Q6P3W2 148 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 LRRC8DQ7L1W4 858 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 PHLDB2Q86SQ0 1253 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 FAM126BQ8IXS8 530 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 FEZF2Q8TBJ5 459 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 SYNCQ9H7C4 482 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 RGS18Q9NS28 235 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 WDR35Q9P2L0 1181 aa16.65■□□□□ 0.26
HERPUD1-201ENST00000300302 SCNN1GP51170 649 aa16.64■□□□□ 0.25
HERPUD1-201ENST00000300302 LIMS2Q7Z4I7 341 aa16.64■□□□□ 0.25
HERPUD1-201ENST00000300302 ACOT1Q86TX2 421 aa16.64■□□□□ 0.25
HERPUD1-201ENST00000300302 ECHDC2Q86YB7 292 aa16.64■□□□□ 0.25
HERPUD1-201ENST00000300302 RASGEF1CQ8N431 466 aa16.64■□□□□ 0.25
HERPUD1-201ENST00000300302 MMGT1Q8N4V1 131 aa16.64■□□□□ 0.25
HERPUD1-201ENST00000300302 C3orf20Q8ND61 904 aa16.64■□□□□ 0.25
HERPUD1-201ENST00000300302 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.64■□□□□ 0.25
HERPUD1-201ENST00000300302 C18orf8Q96DM3 657 aa16.64■□□□□ 0.25
HERPUD1-201ENST00000300302 NAP1L3Q99457 506 aaPredicted RBP16.64■□□□□ 0.25
HERPUD1-201ENST00000300302 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.64■□□□□ 0.257e-9■■□□□ 13.7
HERPUD1-201ENST00000300302 FTHL17Q9BXU8 183 aa16.64■□□□□ 0.25
HERPUD1-201ENST00000300302 MIS12Q9H081 205 aa16.64■□□□□ 0.25
HERPUD1-201ENST00000300302 EHD2Q9NZN4 543 aa16.64■□□□□ 0.25
HERPUD1-201ENST00000300302 TSPAN16Q9UKR8 245 aa16.64■□□□□ 0.25
HERPUD1-201ENST00000300302 PODXLO00592 558 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 PROSCO94903 275 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 RHOXF2BP0C7M4 288 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 CTNNA2P26232 953 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 CTNNA1P35221 906 aaKnown RBP16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 GPD2P43304 727 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 CTCFP49711 727 aaPredicted RBP16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 LLGL2Q6P1M3 1020 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 FBXO46Q6PJ61 603 aaPredicted RBP16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 FAM43BQ6ZT52 329 aaPredicted RBP16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 SLC24A5Q71RS6 500 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 ADGRF2Q8IZF7 708 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 KBTBD7Q8WVZ9 684 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 CD101Q93033 1021 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 TNIP3Q96KP6 325 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 RHOXF2Q9BQY4 288 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 SMARCAL1Q9NZC9 954 aa16.63■□□□□ 0.25
HERPUD1-201ENST00000300302 HESX1Q9UBX0 185 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms