RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 KCTD2Q14681 263 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 ERICH1Q86X53 443 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 PHF13Q86YI8 300 aaPredicted RBP11.79□□□□□ -0.52
IDH3A-201ENST00000299518 CDCA5Q96FF9 252 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 CABS1Q96KC9 395 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 NIF3L1Q9GZT8 377 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 AKT3Q9Y243 479 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.79□□□□□ -0.52
IDH3A-201ENST00000299518 NEU2Q9Y3R4 380 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 LDHAP00338 332 aaKnown RBP11.79□□□□□ -0.52
IDH3A-201ENST00000299518 MMP13P45452 471 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 RGS7P49802 495 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 ARSEP51690 589 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 BPIFB4P59827 614 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 MOGSQ13724 837 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 GLRA4Q5JXX5 417 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 MAP1SQ66K74 1059 aaPredicted RBP11.79□□□□□ -0.52
IDH3A-201ENST00000299518 HOOK3Q86VS8 718 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 ARFGAP2Q8N6H7 521 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 ATL2Q8NHH9 583 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 SPOCK2Q92563 424 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 ANK1P16157 1881 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 TMEM120BA0PK00 339 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 POC1B-GALNT4F8VUJ3 575 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 ERBB2P04626 1255 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 EFTUD2Q15029 972 aaKnown RBP eCLIP11.79□□□□□ -0.52
IDH3A-201ENST00000299518 PPP2R5EQ16537 467 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 NPNTQ6UXI9 565 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 WDR49Q8IV35 697 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 UBR7Q8N806 425 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 AFG1LQ8WV93 481 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 HSPH1Q92598 858 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 PAIP2Q9BPZ3 127 aaKnown RBP11.79□□□□□ -0.52
IDH3A-201ENST00000299518 TMEM134Q9H6X4 195 aa11.79□□□□□ -0.52
IDH3A-201ENST00000299518 METTL5Q9NRN9 209 aaKnown RBP11.79□□□□□ -0.52
IDH3A-201ENST00000299518 TCRBV7S3A2A0A539 114 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 YBX3P16989 372 aaKnown RBP eCLIP11.78□□□□□ -0.52
IDH3A-201ENST00000299518 RFC5P40937 340 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 GCLCP48506 637 aaPredicted RBP11.78□□□□□ -0.52
IDH3A-201ENST00000299518 MBTD1Q05BQ5 628 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 ANKRD22Q5VYY1 191 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 CCDC62Q6P9F0 684 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 CCDC13Q8IYE1 715 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 ZNF317Q96PQ6 595 aaPredicted RBP11.78□□□□□ -0.52
IDH3A-201ENST00000299518 RBM15Q96T37 977 aaKnown RBP eCLIP11.78□□□□□ -0.52
IDH3A-201ENST00000299518 SAYSD1Q9NPB0 183 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 NR2E3Q9Y5X4 410 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 TCRBV5S1A1TA0A578 114 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 H0YCG3 227 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 KIAA0754O94854 1291 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 TTC4O95801 387 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 PECAM1P16284 738 aaPredicted RBP11.78□□□□□ -0.52
IDH3A-201ENST00000299518 PTK6Q13882 451 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 CCDC142Q17RM4 750 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 C15orf59Q2T9L4 293 aaPredicted RBP11.78□□□□□ -0.52
IDH3A-201ENST00000299518 IER5Q5VY09 327 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 VSTM1Q6UX27 236 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 ZBTB8OSQ8IWT0 167 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 MORC4Q8TE76 937 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 ELOVL4Q9GZR5 314 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 FGFR1OP2Q9NVK5 253 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 SGK1O00141 431 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 STAG3L1P0CL83 205 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 PSMA2P25787 234 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 EIF3BP55884 814 aaKnown RBP11.78□□□□□ -0.52
IDH3A-201ENST00000299518 PSMC1P62191 440 aaKnown RBP11.78□□□□□ -0.52
IDH3A-201ENST00000299518 MCL1Q07820 350 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 TTC31Q49AM3 519 aaPredicted RBP11.78□□□□□ -0.52
IDH3A-201ENST00000299518 KCNV1Q6PIU1 500 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 MPZL3Q6UWV2 235 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 ZNF677Q86XU0 584 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 FAM129AQ9BZQ8 928 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 MRPL47Q9HD33 250 aaKnown RBP11.78□□□□□ -0.52
IDH3A-201ENST00000299518 PTPRHQ9HD43 1115 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 GPATCH2LQ9NWQ4 482 aa11.78□□□□□ -0.52
IDH3A-201ENST00000299518 A0A087WUV0 522 aaPredicted RBP11.77□□□□□ -0.52
IDH3A-201ENST00000299518 H0YHG0 523 aa11.77□□□□□ -0.52
IDH3A-201ENST00000299518 LIASO43766 372 aa11.77□□□□□ -0.52
IDH3A-201ENST00000299518 GAS8O95995 478 aa11.77□□□□□ -0.52
IDH3A-201ENST00000299518 TBXAS1P24557 533 aaPredicted RBP11.77□□□□□ -0.52
IDH3A-201ENST00000299518 KLRC2P26717 231 aa11.77□□□□□ -0.52
IDH3A-201ENST00000299518 POLR2BP30876 1174 aaKnown RBP11.77□□□□□ -0.52
IDH3A-201ENST00000299518 RAD23BP54727 409 aa11.77□□□□□ -0.52
IDH3A-201ENST00000299518 TMED2Q15363 201 aa11.77□□□□□ -0.52
IDH3A-201ENST00000299518 TRNP1Q6NT89 227 aa11.77□□□□□ -0.52
IDH3A-201ENST00000299518 C6orf89Q6UWU4 347 aa11.77□□□□□ -0.52
IDH3A-201ENST00000299518 SPOCD1Q6ZMY3 1216 aa11.77□□□□□ -0.52
IDH3A-201ENST00000299518 CHMP6Q96FZ7 201 aa11.77□□□□□ -0.52
IDH3A-201ENST00000299518 PGM2Q96G03 612 aa11.77□□□□□ -0.52
IDH3A-201ENST00000299518 SYNCQ9H7C4 482 aa11.77□□□□□ -0.52
IDH3A-201ENST00000299518 F5H423 210 aaPredicted RBP11.77□□□□□ -0.53
IDH3A-201ENST00000299518 LRCH4O75427 683 aa11.77□□□□□ -0.53
IDH3A-201ENST00000299518 ARF4P18085 180 aaPredicted RBP11.77□□□□□ -0.53
IDH3A-201ENST00000299518 SLC1A1P43005 524 aa11.77□□□□□ -0.53
IDH3A-201ENST00000299518 C1QBPQ07021 282 aaKnown RBP11.77□□□□□ -0.53
IDH3A-201ENST00000299518 SMAD1Q15797 465 aaKnown RBP11.77□□□□□ -0.53
IDH3A-201ENST00000299518 CNGA2Q16280 664 aa11.77□□□□□ -0.53
IDH3A-201ENST00000299518 KIZQ2M2Z5 673 aa11.77□□□□□ -0.53
IDH3A-201ENST00000299518 MSS51Q4VC12 460 aa11.77□□□□□ -0.53
IDH3A-201ENST00000299518 PRAMEF19Q5SWL8 479 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms