RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 KCNT2Q6UVM3 1135 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 LRSAM1Q6UWE0 723 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 CAPN12Q6ZSI9 719 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 TAS1R1Q7RTX1 841 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 FILIP1Q7Z7B0 1213 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 GAS2L3Q86XJ1 694 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 WDR49Q8IV35 697 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 CD302Q8IX05 232 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 HACE1Q8IYU2 909 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 RNF168Q8IYW5 571 aaPredicted RBP6.37□□□□□ -1.39
SSX3-201ENST00000298396 ALDH16A1Q8IZ83 802 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 ENOX1Q8TC92 643 aaKnown RBP6.37□□□□□ -1.39
SSX3-201ENST00000298396 URGCPQ8TCY9 931 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 HASPINQ8TF76 798 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 GDPD5Q8WTR4 605 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 CCDC127Q96BQ5 260 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 TIFAQ96CG3 184 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 IGSF21Q96ID5 467 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 CNOT6LQ96LI5 555 aaKnown RBP6.37□□□□□ -1.39
SSX3-201ENST00000298396 RPS6KC1Q96S38 1066 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 BPIFA3Q9BQP9 254 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 MRPL9Q9BYD2 267 aaKnown RBP6.37□□□□□ -1.39
SSX3-201ENST00000298396 PHACTR1Q9C0D0 580 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 XYLT2Q9H1B5 865 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 ASB7Q9H672 318 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 CERS4Q9HA82 394 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 KIAA1586Q9HCI6 787 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 FANCLQ9NW38 375 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 MTUS1Q9ULD2 1270 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 PRG3Q9Y2Y8 225 aaPredicted RBP6.37□□□□□ -1.39
SSX3-201ENST00000298396 DERAQ9Y315 318 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 NFE2L3Q9Y4A8 694 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 PCDHGC5Q9Y5F6 944 aa6.37□□□□□ -1.39
SSX3-201ENST00000298396 C5orf42Q9H799 3197 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 DENND4AQ7Z401 1863 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 COL6A3P12111 3177 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 TMEM189-UBE2V1I3L0A0 370 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 I3L4J1 428 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 PODXLO00592 558 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 TNFRSF10BO14763 440 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 GRM6O15303 877 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 LETM1O95202 739 aaPredicted RBP6.36□□□□□ -1.39
SSX3-201ENST00000298396 CST3P01034 146 aaPredicted RBP6.36□□□□□ -1.39
SSX3-201ENST00000298396 ITGB3P05106 788 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 EPB41P11171 864 aaKnown RBP6.36□□□□□ -1.39
SSX3-201ENST00000298396 ATP1A3P13637 1013 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 LAG3P18627 525 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 RPL13P26373 211 aaKnown RBP6.36□□□□□ -1.39
SSX3-201ENST00000298396 POLR2BP30876 1174 aaKnown RBP6.36□□□□□ -1.39
SSX3-201ENST00000298396 CTNNB1P35222 781 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 BRCC3P46736 316 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 GCLMP48507 274 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 AARSP49588 968 aaKnown RBP eCLIP6.36□□□□□ -1.39
SSX3-201ENST00000298396 FXR1P51114 621 aaKnown RBP eCLIP6.36□□□□□ -1.39
SSX3-201ENST00000298396 VAMP7P51809 220 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 TFAMQ00059 246 aaKnown RBP6.36□□□□□ -1.39
SSX3-201ENST00000298396 MYL5Q02045 173 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 RNASELQ05823 741 aaKnown RBP6.36□□□□□ -1.39
SSX3-201ENST00000298396 ENPEPQ07075 957 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 HSP90AA2PQ14568 343 aaPredicted RBP6.36□□□□□ -1.39
SSX3-201ENST00000298396 ZACNQ401N2 412 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 ZNF787Q6DD87 383 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 INTS8Q75QN2 995 aaKnown RBP6.36□□□□□ -1.39
SSX3-201ENST00000298396 SV2AQ7L0J3 742 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 Q7L0L9 218 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 TRAPPC11Q7Z392 1133 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 LIMS2Q7Z4I7 341 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 FRMD5Q7Z6J6 570 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 LUZP1Q86V48 1076 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 NLRP8Q86W28 1048 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 ABI1Q8IZP0 508 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 KLHL23Q8NBE8 558 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 LMO3Q8TAP4 145 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 SPPL3Q8TCT6 385 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 TAS1R2Q8TE23 839 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 SEMA4DQ92854 862 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 B3GALT6Q96L58 329 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 ZNF558Q96NG5 402 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 TGS1Q96RS0 853 aaKnown RBP6.36□□□□□ -1.39
SSX3-201ENST00000298396 TMEM175Q9BSA9 504 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 GPR62Q9BZJ7 368 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 THAP9Q9H5L6 903 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 APOBEC3GQ9HC16 384 aaKnown RBP6.36□□□□□ -1.39
SSX3-201ENST00000298396 ALG13Q9NP73 1137 aaKnown RBP6.36□□□□□ -1.39
SSX3-201ENST00000298396 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.36□□□□□ -1.39
SSX3-201ENST00000298396 CUEDC1Q9NWM3 386 aaPredicted RBP6.36□□□□□ -1.39
SSX3-201ENST00000298396 DPP3Q9NY33 737 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 KANSL3Q9P2N6 904 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 EGFL7Q9UHF1 273 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 MSRAQ9UJ68 235 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 UBQLN1Q9UMX0 589 aaKnown RBP6.36□□□□□ -1.39
SSX3-201ENST00000298396 FRMD4BQ9Y2L6 1034 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 NME7Q9Y5B8 376 aa6.36□□□□□ -1.39
SSX3-201ENST00000298396 KCNJ18B7U540 433 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 H3BM21 787 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 H3BNC9 293 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 M0QZQ0 153 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 IKBKBO14920 756 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 FSCN2O14926 492 aa6.35□□□□□ -1.39
SSX3-201ENST00000298396 HCRTO43612 131 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms