RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 TSPY1Q01534 308 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 LRRC63Q05C16 580 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 SOWAHAQ2M3V2 549 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 TDRD10Q5VZ19 366 aaKnown RBP12.95□□□□□ -0.34
HMGB2-201ENST00000296503 OTOP3Q7RTS5 596 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 RNF135Q8IUD6 432 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 DCP1BQ8IZD4 617 aaKnown RBP12.95□□□□□ -0.34
HMGB2-201ENST00000296503 ADGRF2Q8IZF7 708 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 OR10T2Q8NGX3 314 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 RTP3Q9BQQ7 232 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 ZCWPW1Q9H0M4 648 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 NXF1Q9UBU9 619 aaKnown RBP12.95□□□□□ -0.34
HMGB2-201ENST00000296503 SLC27A5Q9Y2P5 690 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 C2CD4DB7Z1M9 353 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 PPP1R3GB7ZBB8 358 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 PTPN2P17706 415 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 BMP6P22004 513 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 GABPB1Q06547 395 aaPredicted RBP12.95□□□□□ -0.34
HMGB2-201ENST00000296503 NCOA4Q13772 614 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 SV2AQ7L0J3 742 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 ELMOD1Q8N336 334 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 PLCD3Q8N3E9 789 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 TDRD5Q8NAT2 981 aaKnown RBP12.95□□□□□ -0.34
HMGB2-201ENST00000296503 ATAD1Q8NBU5 361 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 NELFBQ8WX92 580 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 ZNF512Q96ME7 567 aaPredicted RBP12.95□□□□□ -0.34
HMGB2-201ENST00000296503 MKNK1Q9BUB5 465 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 CLSTN2Q9H4D0 955 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 USTQ9Y2C2 406 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 INSL5Q9Y5Q6 135 aa12.95□□□□□ -0.34
HMGB2-201ENST00000296503 C5orf42Q9H799 3197 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 CLUHO75153 1309 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 MTMR11A4FU01 709 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 GOLGA6L6A8MZA4 724 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 PAPLNO95428 1278 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 TRIM49P0CI25 452 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 TRIM49CP0CI26 452 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 ACAT1P24752 427 aaKnown RBP12.94□□□□□ -0.34
HMGB2-201ENST00000296503 ALDH1A3P47895 512 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 GCLMP48507 274 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 NTHL1P78549 312 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 TWF1Q12792 350 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 SGSM1Q2NKQ1 1148 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 ZNF699Q32M78 642 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 IQCEQ6IPM2 695 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 LRRTM3Q86VH5 581 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 OSTM1Q86WC4 334 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 TRIML1Q8N9V2 468 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 ACBD6Q9BR61 282 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 NUP62CLQ9H1M0 184 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 SNX25Q9H3E2 840 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 HCFC1R1Q9NWW0 138 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 OGFRQ9NZT2 677 aa12.94□□□□□ -0.34
HMGB2-201ENST00000296503 DNMT3BQ9UBC3 853 aaKnown RBP12.94□□□□□ -0.34
HMGB2-201ENST00000296503 BICDL2A1A5D9 508 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 VNN1O95497 513 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 ADCY5O95622 1261 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 PDGFRBP09619 1106 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 FSHRP23945 695 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 PCSK1P29120 753 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 STX17P56962 302 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 SMARCB1Q12824 385 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 ZACNQ401N2 412 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 PABPC1LQ4VXU2 614 aaKnown RBP12.93□□□□□ -0.34
HMGB2-201ENST00000296503 ZNF667Q5HYK9 610 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 C1orf220Q5T0J3 134 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 TCERG1LQ5VWI1 586 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 GET4Q7L5D6 327 aaPredicted RBP12.93□□□□□ -0.34
HMGB2-201ENST00000296503 CREBRFQ8IUR6 639 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 SPATA18Q8TC71 538 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 CORO1BQ9BR76 489 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 FUCA2Q9BTY2 467 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 LIMD1Q9UGP4 676 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 CTNND2Q9UQB3 1225 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 C2orf16Q68DN1 1984 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 BDP1A6H8Y1 2624 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 GABRDO14764 452 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 STX10O60499 249 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 VNN2O95498 520 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 STAU1O95793 577 aaKnown RBP12.93□□□□□ -0.34
HMGB2-201ENST00000296503 HLA-DRAP01903 254 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 LMO2P25791 158 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 GNL1P36915 607 aaPredicted RBP12.93□□□□□ -0.34
HMGB2-201ENST00000296503 PIK3CAP42336 1068 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 TUFMP49411 452 aaKnown RBP12.93□□□□□ -0.34
HMGB2-201ENST00000296503 EPHB3P54753 998 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 PPP3CAQ08209 521 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 MGAT5BQ3V5L5 792 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 RNF214Q8ND24 703 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 OR6B3Q8NGW1 331 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 KHSRPQ92945 711 aaKnown RBP eCLIP12.93□□□□□ -0.345e-9■□□□□ 9.7
HMGB2-201ENST00000296503 ELMO3Q96BJ8 720 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 SEPT5Q99719 369 aaPredicted RBP12.93□□□□□ -0.34
HMGB2-201ENST00000296503 XYLT2Q9H1B5 865 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 CRISPLD1Q9H336 500 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.93□□□□□ -0.348e-9■■■□□ 14.8
HMGB2-201ENST00000296503 ABI2Q9NYB9 513 aaPredicted RBP12.93□□□□□ -0.34
HMGB2-201ENST00000296503 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.93□□□□□ -0.344e-12■■■■■ 29.4
HMGB2-201ENST00000296503 GTF3C4Q9UKN8 822 aa12.93□□□□□ -0.34
HMGB2-201ENST00000296503 YIPF1Q9Y548 306 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms