RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 CCDC195A0A1B0GUA6 201 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 H3BSA7 217 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 J3QRK9 145 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 PSMD12O00232 456 aaPredicted RBP12.24□□□□□ -0.45
SNIP1-201ENST00000296215 MAPRE1Q15691 268 aaKnown RBP12.24□□□□□ -0.45
SNIP1-201ENST00000296215 KLHL38Q2WGJ6 581 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 PLA2G4EQ3MJ16 856 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 FBXL8Q96CD0 374 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 PACSIN1Q9BY11 444 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 GDAP2Q9NXN4 497 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 MAFFQ9ULX9 164 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 WASF2Q9Y6W5 498 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 UBE4BO95155 1302 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 PDS5AQ29RF7 1337 aaKnown RBP12.24□□□□□ -0.45
SNIP1-201ENST00000296215 SYNGAP1Q96PV0 1343 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 SBNO2Q9Y2G9 1366 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 FAM172BPA6NC97 362 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 MINDY4BA8MYZ0 360 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 CLDN25C9JDP6 229 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 GSC2O15499 205 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 LZTS3O60299 673 aaPredicted RBP12.24□□□□□ -0.45
SNIP1-201ENST00000296215 EIF2AK2P19525 551 aaKnown RBP12.24□□□□□ -0.45
SNIP1-201ENST00000296215 IL10P22301 178 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 GNA11P29992 359 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 ARMCX4Q5H9R4 360 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 LAYNQ6UX15 382 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 GPBP1Q86WP2 473 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 JAMLQ86YT9 394 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 EIF1ADQ8N9N8 165 aaKnown RBP12.24□□□□□ -0.45
SNIP1-201ENST00000296215 GCOM2Q9BZD3 368 aaPredicted RBP12.24□□□□□ -0.45
SNIP1-201ENST00000296215 ELOVL6Q9H5J4 265 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 PSTPIP2Q9H939 334 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 POLR1BQ9H9Y6 1135 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 KCTD5Q9NXV2 234 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 SNTG2Q9NY99 539 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 GRIN2BQ13224 1484 aa12.24□□□□□ -0.45
SNIP1-201ENST00000296215 OR7A10O76100 309 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 MED26O95402 600 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 MYL2P10916 166 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 CDK4P11802 303 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 CASP1P29466 404 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 ADD1P35611 737 aaKnown RBP12.23□□□□□ -0.45
SNIP1-201ENST00000296215 STX5Q13190 355 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 RPS6KA2Q15349 733 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 TPTE2Q6XPS3 522 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 VANGL1Q8TAA9 524 aaPredicted RBP12.23□□□□□ -0.45
SNIP1-201ENST00000296215 ADAM33Q9BZ11 813 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.23□□□□□ -0.45
SNIP1-201ENST00000296215 RGS17Q9UGC6 210 aaPredicted RBP12.23□□□□□ -0.45
SNIP1-201ENST00000296215 SRP68Q9UHB9 627 aaKnown RBP12.23□□□□□ -0.45
SNIP1-201ENST00000296215 STARD13Q9Y3M8 1113 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 MMP13P45452 471 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 GDI2P50395 445 aaKnown RBP12.23□□□□□ -0.45
SNIP1-201ENST00000296215 TMEM132EQ6IEE7 984 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 SNRNP48Q6IEG0 339 aaKnown RBP12.23□□□□□ -0.45
SNIP1-201ENST00000296215 SYTL1Q8IYJ3 562 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 RNASE11Q8TAA1 199 aaKnown RBP12.23□□□□□ -0.45
SNIP1-201ENST00000296215 FRMD8Q9BZ67 464 aaPredicted RBP12.23□□□□□ -0.45
SNIP1-201ENST00000296215 NUP160Q12769 1436 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 FCHO1O14526 889 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 AIM2O14862 343 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 GRM1Q13255 1194 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 ZNF267Q14586 743 aaPredicted RBP12.23□□□□□ -0.45
SNIP1-201ENST00000296215 C1orf141Q5JVX7 400 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 MTG1Q9BT17 334 aaPredicted RBP12.23□□□□□ -0.45
SNIP1-201ENST00000296215 TMEM120AQ9BXJ8 343 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 CNOT7Q9UIV1 285 aaKnown RBP12.23□□□□□ -0.45
SNIP1-201ENST00000296215 PCDHGA10Q9Y5H3 936 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 FDFT1P37268 417 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 MAGEA4P43358 317 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 MAPK12P53778 367 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 TCHHL1Q5QJ38 904 aaPredicted RBP12.23□□□□□ -0.45
SNIP1-201ENST00000296215 OGFOD2Q6N063 350 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 ZBTB49Q6ZSB9 765 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 RFPL4BQ6ZWI9 263 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 MAGED4Q96JG8 741 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 SNRKQ9NRH2 765 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 ARMC1Q9NVT9 282 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 CYTH4Q9UIA0 394 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 INPP5FQ9Y2H2 1132 aa12.23□□□□□ -0.45
SNIP1-201ENST00000296215 ENO3P13929 434 aaPredicted RBP12.22□□□□□ -0.45
SNIP1-201ENST00000296215 PHKA1P46020 1223 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 KCNJ8Q15842 424 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 PABPC1LQ4VXU2 614 aaKnown RBP12.22□□□□□ -0.45
SNIP1-201ENST00000296215 STYK1Q6J9G0 422 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 TMC7Q7Z402 723 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 ZNF589Q86UQ0 364 aaPredicted RBP12.22□□□□□ -0.45
SNIP1-201ENST00000296215 THEMISQ8N1K5 641 aaPredicted RBP12.22□□□□□ -0.45
SNIP1-201ENST00000296215 AGTPBP1Q9UPW5 1226 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 ABCC2Q92887 1545 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 TYW5A2RUC4 315 aaKnown RBP12.22□□□□□ -0.45
SNIP1-201ENST00000296215 CAPN8A6NHC0 703 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 TCN1P20061 433 aaPredicted RBP12.22□□□□□ -0.45
SNIP1-201ENST00000296215 ACSBG2Q5FVE4 666 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 C16orf89Q6UX73 402 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 ECHDC2Q86YB7 292 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 FBXO25Q8TCJ0 367 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 SEMA4AQ9H3S1 761 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 ENTPD7Q9NQZ7 604 aa12.22□□□□□ -0.45
SNIP1-201ENST00000296215 MPP6Q9NZW5 540 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms