RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 SNRNP35Q16560 246 aaKnown RBP14.07□□□□□ -0.16
HPS3-201ENST00000296051 TAF1BQ53T94 588 aaPredicted RBP14.07□□□□□ -0.16
HPS3-201ENST00000296051 SPOPLQ6IQ16 392 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 LRRC55Q6ZSA7 311 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 SPATA2LQ8IUW3 424 aaPredicted RBP14.07□□□□□ -0.16
HPS3-201ENST00000296051 C3orf20Q8ND61 904 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 SH3TC2Q8TF17 1288 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 OSBPL7Q9BZF2 842 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 SPATC1LQ9H0A9 340 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 IKZF4Q9H2S9 585 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 GPRC5CQ9NQ84 441 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 FARP1Q9Y4F1 1045 aaPredicted RBP14.07□□□□□ -0.16
HPS3-201ENST00000296051 BCL9O00512 1426 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 ADAMTS3O15072 1205 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 ICAM1P05362 532 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 NFKBIAP25963 317 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 MOB2Q70IA6 237 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 FAM83AQ86UY5 434 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 LCA5Q86VQ0 697 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 PCSK9Q8NBP7 692 aaKnown RBP14.07□□□□□ -0.16
HPS3-201ENST00000296051 PRPF31Q8WWY3 499 aaKnown RBP14.07□□□□□ -0.16
HPS3-201ENST00000296051 ALKBH8Q96BT7 664 aaKnown RBP14.07□□□□□ -0.16
HPS3-201ENST00000296051 TNIP3Q96KP6 325 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 FAM111AQ96PZ2 611 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 MOV10L1Q9BXT6 1211 aaKnown RBP14.07□□□□□ -0.16
HPS3-201ENST00000296051 PAPOLBQ9NRJ5 636 aaKnown RBP14.07□□□□□ -0.16
HPS3-201ENST00000296051 UVRAGQ9P2Y5 699 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 MAFGO15525 162 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 KRT38O76015 456 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 HMBSP08397 361 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 MGAT5BQ3V5L5 792 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 SLC4A9Q96Q91 983 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 P2RX7Q99572 595 aaKnown RBP14.07□□□□□ -0.16
HPS3-201ENST00000296051 RTFDC1Q9BY42 306 aaPredicted RBP14.07□□□□□ -0.16
HPS3-201ENST00000296051 NEUROG2Q9H2A3 272 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 SMG5Q9UPR3 1016 aaKnown RBP14.07□□□□□ -0.16
HPS3-201ENST00000296051 TRAF3IP3Q9Y228 551 aa14.07□□□□□ -0.16
HPS3-201ENST00000296051 APRTP07741 180 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 ATP6V1B1P15313 513 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 PSMC1P62191 440 aaKnown RBP14.06□□□□□ -0.16
HPS3-201ENST00000296051 PPP1R2P3Q6NXS1 205 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 SLC47A2Q86VL8 602 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 SLC35C1Q96A29 364 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 YME1L1Q96TA2 773 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 CACYBPQ9HB71 228 aaKnown RBP14.06□□□□□ -0.16
HPS3-201ENST00000296051 C17orf102A2RUQ5 167 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 MSH4O15457 936 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 LGR5O75473 907 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 CALCAP01258 141 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 SLURP2P0DP57 97 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 RARAP10276 462 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 DRD4P21917 467 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 USP50Q70EL3 339 aaPredicted RBP14.06□□□□□ -0.16
HPS3-201ENST00000296051 NDUFAF2Q8N183 169 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 KLK14Q9P0G3 267 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 PCDHB7Q9Y5E2 793 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 RRN3P2A6NIE6 340 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 TLR2O60603 784 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 ACTR2P61160 394 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 KIZQ2M2Z5 673 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 DACT2Q5SW24 774 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 ERMARDQ5T6L9 678 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 FAXCQ5TGI0 409 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 OLFML2BQ68BL8 750 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 NUDT18Q6ZVK8 323 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 CBWD2Q8IUF1 395 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 SLC25A41Q8N5S1 370 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 MCEEQ96PE7 176 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 TUFT1Q9NNX1 390 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 PSMC3IPQ9P2W1 217 aaPredicted RBP14.06□□□□□ -0.16
HPS3-201ENST00000296051 PPP2R3BQ9Y5P8 575 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 CXCL11O14625 94 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 APOEP02649 317 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 RRM1P23921 792 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 EEF1B2P24534 225 aaKnown RBP14.06□□□□□ -0.16
HPS3-201ENST00000296051 CASP2P42575 452 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 CLCN3P51790 818 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 MED21Q13503 144 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 THEMIS2Q5TEJ8 643 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 CXorf38Q8TB03 319 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 HDAC11Q96DB2 347 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 TARS2Q9BW92 718 aaKnown RBP14.06□□□□□ -0.16
HPS3-201ENST00000296051 RANBP17Q9H2T7 1088 aaKnown RBP14.06□□□□□ -0.16
HPS3-201ENST00000296051 GPRC5DQ9NZD1 345 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 TMX2Q9Y320 296 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 COL5A2P05997 1499 aaPredicted RBP14.06□□□□□ -0.16
HPS3-201ENST00000296051 SLIT1O75093 1534 aa14.06□□□□□ -0.16
HPS3-201ENST00000296051 A8MUI8 341 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 B3GAT3O94766 335 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 TTC4O95801 387 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 FUT2Q10981 343 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 TMTC4Q5T4D3 741 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 KAT5Q92993 513 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 FGFBP2Q9BYJ0 223 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 MRPL46Q9H2W6 279 aaKnown RBP14.05□□□□□ -0.16
HPS3-201ENST00000296051 NFIBO00712 420 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 ASAP2O43150 1006 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 SNX3O60493 162 aa14.05□□□□□ -0.16
HPS3-201ENST00000296051 HNRNPCP07910 306 aaKnown RBP eCLIP14.05□□□□□ -0.16
HPS3-201ENST00000296051 HIC1Q14526 733 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms