RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 YY1P25490 414 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 ARHGEF16Q5VV41 709 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 TMEM120AQ9BXJ8 343 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 CADM1Q9BY67 442 aaKnown RBP15.48■□□□□ 0.07
CCNF-201ENST00000293968 PCSK1NQ9UHG2 260 aa15.48■□□□□ 0.07
CCNF-201ENST00000293968 WDR64B1ANS9 1081 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 CD19P15391 556 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 BGNP21810 368 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 GCNT1Q02742 428 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 SLC45A4Q5BKX6 768 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 STRIP1Q5VSL9 837 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 SPOCD1Q6ZMY3 1216 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 MON1BQ7L1V2 547 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 MAP4K3Q8IVH8 894 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.47■□□□□ 0.07
CCNF-201ENST00000293968 ATP11CQ8NB49 1132 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 DENND1AQ8TEH3 1009 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 PRR11Q96HE9 360 aaPredicted RBP15.47■□□□□ 0.07
CCNF-201ENST00000293968 PAPOLBQ9NRJ5 636 aaKnown RBP15.47■□□□□ 0.07
CCNF-201ENST00000293968 UMODL1Q5DID0 1318 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 PRPF4O43172 522 aaKnown RBP eCLIP15.47■□□□□ 0.07
CCNF-201ENST00000293968 ENO1P06733 434 aaKnown RBP15.47■□□□□ 0.07
CCNF-201ENST00000293968 INHBAP08476 426 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 KCNA3P22001 575 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 GLRA2P23416 452 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 KDSRQ06136 332 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 VPS72Q15906 364 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 SWSAP1Q6NVH7 229 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 TMC2Q8TDI7 906 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 NSL1Q96IY1 281 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 SLITRK1Q96PX8 696 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 RANBP17Q9H2T7 1088 aaKnown RBP15.47■□□□□ 0.07
CCNF-201ENST00000293968 PIDD1Q9HB75 910 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 ZWINTO95229 277 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 PGM1P36871 562 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 DGKZQ13574 1117 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 PLEKHG4Q58EX7 1191 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 DACT2Q5SW24 774 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 C4orf50Q6ZRC1 276 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 CDAN1Q8IWY9 1227 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 ABRAQ8N0Z2 381 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 CFAP36Q96G28 342 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 RILPQ96NA2 401 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 RMDN3Q96TC7 470 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 TTC1Q99614 292 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 MIPEPQ99797 713 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 ZNF341Q9BYN7 854 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 TRIM4Q9C037 500 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 PPARGC1AQ9UBK2 798 aaKnown RBP15.47■□□□□ 0.07
CCNF-201ENST00000293968 LRRC42Q9Y546 428 aa15.47■□□□□ 0.07
CCNF-201ENST00000293968 COL16A1Q07092 1604 aaPredicted RBP15.47■□□□□ 0.07
CCNF-201ENST00000293968 MAP3K7O43318 606 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 LMNAP02545 664 aaKnown RBP15.46■□□□□ 0.07
CCNF-201ENST00000293968 NCKAP1LP55160 1127 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 IRX4P78413 519 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 MORF4L2Q15014 288 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 NBPF20Q3BBV1 942 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 ANKRD22Q5VYY1 191 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 SLC39A4Q6P5W5 647 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 ALLCQ8N6M5 410 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 ZNF516Q92618 1163 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 TBC1D22BQ9NU19 505 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 CDK5RAP2Q96SN8 1893 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 NLRP11P59045 1033 aaKnown RBP15.46■□□□□ 0.07
CCNF-201ENST00000293968 CUL2Q13617 745 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 MEX3CQ5U5Q3 659 aaKnown RBP15.46■□□□□ 0.07
CCNF-201ENST00000293968 TTC7BQ86TV6 843 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 PDIK1LQ8N165 341 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 GBP5Q96PP8 586 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 BTBD10Q9BSF8 475 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 FOXP3Q9BZS1 431 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 SBF2Q86WG5 1849 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 ATAD5Q96QE3 1844 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 H3BRJ5 948 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 DHX15O43143 795 aaKnown RBP15.46■□□□□ 0.07
CCNF-201ENST00000293968 ZCCHC18P0CG32 403 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 MYL2P10916 166 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 BRD2P25440 801 aaKnown RBP15.46■□□□□ 0.07
CCNF-201ENST00000293968 GTF2H1P32780 548 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 NOMO3P69849 1222 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 RFX6Q8HWS3 928 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 ZBTB45Q96K62 511 aaPredicted RBP15.46■□□□□ 0.07
CCNF-201ENST00000293968 DDX50Q9BQ39 737 aaKnown RBP15.46■□□□□ 0.07
CCNF-201ENST00000293968 C2CD2Q9Y426 696 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 C10orf71Q711Q0 1435 aa15.46■□□□□ 0.07
CCNF-201ENST00000293968 C2CD2LO14523 706 aa15.46■□□□□ 0.06
CCNF-201ENST00000293968 CST8O60676 142 aa15.46■□□□□ 0.06
CCNF-201ENST00000293968 PAPOLAP51003 745 aaKnown RBP15.46■□□□□ 0.06
CCNF-201ENST00000293968 NRLP54845 237 aa15.46■□□□□ 0.06
CCNF-201ENST00000293968 VCPP55072 806 aaKnown RBP15.46■□□□□ 0.06
CCNF-201ENST00000293968 C6orf163Q5TEZ5 329 aa15.46■□□□□ 0.06
CCNF-201ENST00000293968 TDRD10Q5VZ19 366 aaKnown RBP15.46■□□□□ 0.06
CCNF-201ENST00000293968 FAM160B2Q86V87 743 aa15.46■□□□□ 0.06
CCNF-201ENST00000293968 TMEM143Q96AN5 459 aa15.46■□□□□ 0.06
CCNF-201ENST00000293968 CALN1Q9BXU9 219 aa15.46■□□□□ 0.06
CCNF-201ENST00000293968 POLR3FQ9H1D9 316 aaPredicted RBP15.46■□□□□ 0.06
CCNF-201ENST00000293968 RBAKQ9NYW8 714 aaPredicted RBP15.46■□□□□ 0.06
CCNF-201ENST00000293968 AGO2Q9UKV8 859 aaKnown RBP15.46■□□□□ 0.06
CCNF-201ENST00000293968 COQ4Q9Y3A0 265 aa15.46■□□□□ 0.06
CCNF-201ENST00000293968 ATRNL1Q5VV63 1379 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms