RNA–Protein interactions for RNA: ENST00000292393.9

ZNF3-201, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 512 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-201ENST00000292393 ANKRD62A6NC57 917 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 USP27XA6NNY8 438 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 O00370 1275 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 KRT86O43790 486 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 TADA2AO75478 443 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 UPP2O95045 317 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 GALTP07902 379 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 H2AFZP0C0S5 128 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 TMEM253P0C7T8 217 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 IGFBP6P24592 240 aaPredicted RBP12.88□□□□□ -0.35
ZNF3-201ENST00000292393 BRD2P25440 801 aaKnown RBP12.88□□□□□ -0.35
ZNF3-201ENST00000292393 PCSK1P29120 753 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 ARHGAP25P42331 645 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 SLC11A1P49279 550 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 HTRA4P83105 476 aaPredicted RBP12.88□□□□□ -0.35
ZNF3-201ENST00000292393 CENPCQ03188 943 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 KIF5AQ12840 1032 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 WSCD1Q658N2 575 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 LCLAT1Q6UWP7 414 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 H2AFVQ71UI9 128 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 OTOP2Q7RTS6 562 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 KIAA1328Q86T90 577 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 TFAP2BQ92481 460 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 VCPIP1Q96JH7 1222 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 HEXIM2Q96MH2 286 aaKnown RBP12.88□□□□□ -0.35
ZNF3-201ENST00000292393 SLC9A7Q96T83 725 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 LBHD1Q9BQE6 289 aaPredicted RBP12.88□□□□□ -0.35
ZNF3-201ENST00000292393 ZSWIM1Q9BR11 485 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 PDCL3Q9H2J4 239 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 CWH43Q9H720 699 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 SEPT11Q9NVA2 429 aaKnown RBP12.88□□□□□ -0.35
ZNF3-201ENST00000292393 MARCH5Q9NX47 278 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 CDH9Q9ULB4 789 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.88□□□□□ -0.35
ZNF3-201ENST00000292393 CEP83Q9Y592 693 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 NME7Q9Y5B8 376 aa12.88□□□□□ -0.35
ZNF3-201ENST00000292393 A0A0A6YYK5 440 aaPredicted RBP12.87□□□□□ -0.35
ZNF3-201ENST00000292393 KIF2AO00139 706 aaPredicted RBP12.87□□□□□ -0.35
ZNF3-201ENST00000292393 GJB5O95377 273 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 EFEMP2O95967 443 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 ITGB1P05556 798 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 CD19P15391 556 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 LMO2P25791 158 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 BRCC3P46736 316 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 EPHB4P54760 987 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 BCAR1P56945 870 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 NOMO3P69849 1222 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 TCEAL1Q15170 157 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 ARHGAP29Q52LW3 1261 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 RASIP1Q5U651 963 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 ACAD10Q6JQN1 1059 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 OSTM1Q86WC4 334 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 PALB2Q86YC2 1186 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 B3GALNT2Q8NCR0 500 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 TMEM35BQ8NCS4 154 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 RABGGTAQ92696 567 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 TRIM11Q96F44 468 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 CALR3Q96L12 384 aaKnown RBP12.87□□□□□ -0.35
ZNF3-201ENST00000292393 ACBD6Q9BR61 282 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.87□□□□□ -0.35
ZNF3-201ENST00000292393 OXCT2Q9BYC2 517 aaPredicted RBP12.87□□□□□ -0.35
ZNF3-201ENST00000292393 TRMT1Q9NXH9 659 aaKnown RBP12.87□□□□□ -0.35
ZNF3-201ENST00000292393 DDX43Q9NXZ2 648 aaKnown RBP12.87□□□□□ -0.35
ZNF3-201ENST00000292393 MYO1AQ9UBC5 1043 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 STK39Q9UEW8 545 aa12.87□□□□□ -0.35
ZNF3-201ENST00000292393 PUF60Q9UHX1 559 aaKnown RBP12.87□□□□□ -0.35
ZNF3-201ENST00000292393 PRG3Q9Y2Y8 225 aaPredicted RBP12.87□□□□□ -0.35
ZNF3-201ENST00000292393 FNDC1Q4ZHG4 1894 aaPredicted RBP12.87□□□□□ -0.35
ZNF3-201ENST00000292393 SF3B1O75533 1304 aaKnown RBP eCLIP12.87□□□□□ -0.354e-6■■■■■ 83.4
ZNF3-201ENST00000292393 ZBBXA8MT70 800 aa12.86□□□□□ -0.35
ZNF3-201ENST00000292393 OAZ2O95190 189 aa12.86□□□□□ -0.35
ZNF3-201ENST00000292393 FTLP02792 175 aaPredicted RBP12.86□□□□□ -0.35
ZNF3-201ENST00000292393 SETSIPP0DME0 302 aa12.86□□□□□ -0.35
ZNF3-201ENST00000292393 MYBL1P10243 752 aa12.86□□□□□ -0.35
ZNF3-201ENST00000292393 LAG3P18627 525 aa12.86□□□□□ -0.35
ZNF3-201ENST00000292393 NSFP46459 744 aaKnown RBP12.86□□□□□ -0.35
ZNF3-201ENST00000292393 ALDH7A1P49419 539 aaKnown RBP12.86□□□□□ -0.35
ZNF3-201ENST00000292393 C1QBPQ07021 282 aaKnown RBP12.86□□□□□ -0.35
ZNF3-201ENST00000292393 BTG3Q14201 252 aaPredicted RBP12.86□□□□□ -0.35
ZNF3-201ENST00000292393 PAN2Q504Q3 1202 aaKnown RBP12.86□□□□□ -0.35
ZNF3-201ENST00000292393 OVOS1Q6IE37 1185 aa12.86□□□□□ -0.35
ZNF3-201ENST00000292393 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.86□□□□□ -0.35
ZNF3-201ENST00000292393 NYAP1Q6ZVC0 841 aa12.86□□□□□ -0.35
ZNF3-201ENST00000292393 ACOT1Q86TX2 421 aa12.86□□□□□ -0.35
ZNF3-201ENST00000292393 PHF13Q86YI8 300 aaPredicted RBP12.86□□□□□ -0.35
ZNF3-201ENST00000292393 THEM5Q8N1Q8 247 aa12.86□□□□□ -0.35
ZNF3-201ENST00000292393 C17orf53Q8N3J3 647 aaPredicted RBP12.86□□□□□ -0.35
ZNF3-201ENST00000292393 RNF10Q8N5U6 811 aaKnown RBP12.86□□□□□ -0.35
ZNF3-201ENST00000292393 DPF3Q92784 378 aa12.86□□□□□ -0.35
ZNF3-201ENST00000292393 CYFIP2Q96F07 1278 aa12.86□□□□□ -0.35
ZNF3-201ENST00000292393 LACRTQ9GZZ8 138 aa12.86□□□□□ -0.35
ZNF3-201ENST00000292393 INSL6Q9Y581 213 aa12.86□□□□□ -0.35
ZNF3-201ENST00000292393 NR2E3Q9Y5X4 410 aa12.86□□□□□ -0.35
ZNF3-201ENST00000292393 RCCD1A6NED2 376 aa12.85□□□□□ -0.35
ZNF3-201ENST00000292393 F8W810 466 aa12.85□□□□□ -0.35
ZNF3-201ENST00000292393 MICAL2O94851 1124 aa12.85□□□□□ -0.35
ZNF3-201ENST00000292393 CALCAP01258 141 aa12.85□□□□□ -0.35
ZNF3-201ENST00000292393 PDGFRBP09619 1106 aa12.85□□□□□ -0.35
ZNF3-201ENST00000292393 SYN1P17600 705 aa12.85□□□□□ -0.35
ZNF3-201ENST00000292393 PTPN1P18031 435 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms