RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 AKAP10O43572 662 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 SUPT3HO75486 399 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 HP1BP3Q5SSJ5 553 aaPredicted RBP18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 SNX30Q5VWJ9 437 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 IZUMO2Q6UXV1 221 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 CDR2LQ86X02 465 aaPredicted RBP18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 KLK7P49862 253 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 EFNA5P52803 228 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 CCDC15Q0P6D6 951 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 STILQ15468 1287 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 CDC42EP5Q6NZY7 148 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 ZFP1Q6P2D0 407 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 UTP6Q9NYH9 597 aaKnown RBP18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 TCRBV5S4A2TA0A5A2 114 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 KPNA4O00629 521 aaPredicted RBP18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 WEE2P0C1S8 567 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 RNF43Q68DV7 783 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 EP400NLQ6ZTU2 488 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 TRIM63Q969Q1 353 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 IFNA8P32881 189 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 COG2Q14746 738 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 PASD1Q8IV76 773 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 NR1H4Q96RI1 486 aaPredicted RBP18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 XPO7Q9UIA9 1087 aaKnown RBP18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 SALL1Q9NSC2 1324 aa18.3■□□□□ 0.52
PCDHA13-201ENST00000289272 FAM58BPP0C7Q3 252 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 THNSL1Q8IYQ7 743 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 TSPAN17Q96FV3 270 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 SH3GL2Q99962 352 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 SCN3BQ9NY72 215 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 PCDHA10Q9Y5I2 948 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 GTPBP10A4D1E9 387 aaKnown RBP18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 SLCO1B7G3V0H7 640 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 GLI1P08151 1106 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 XPAP23025 273 aaPredicted RBP18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 TTKP33981 857 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 LRRC74BQ6ZQY2 392 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 CCNYL1Q8N7R7 359 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 EPS8L3Q8TE67 593 aaKnown RBP18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 MRPL4Q9BYD3 311 aaKnown RBP18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 ABCF3Q9NUQ8 709 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 SPRP35270 261 aaPredicted RBP18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 DCTN2Q13561 401 aaKnown RBP18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 C7orf31Q8N865 590 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 LRRC10BA6NIK2 292 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 TRPC4APQ8TEL6 797 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 ZNF184Q99676 751 aaPredicted RBP18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 NGRNQ9NPE2 291 aaKnown RBP18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 LZTS1Q9Y250 596 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 FCGR1AP12314 374 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 GZMAP12544 262 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 SWSAP1Q6NVH7 229 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 XRRA1Q6P2D8 792 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 RPAP3Q9H6T3 665 aaPredicted RBP18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 FAM153AQ9UHL3 310 aa18.29■□□□□ 0.52
PCDHA13-201ENST00000289272 GLRA3O75311 464 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 ZNF394Q53GI3 561 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 FOXR1Q6PIV2 292 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 C3orf62Q6ZUJ4 267 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 ANKMY2Q8IV38 441 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 LRRN4CLQ8ND94 238 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 SLC8A2Q9UPR5 921 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 SORCS3Q9UPU3 1222 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 RPA1P27694 616 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 PMLP29590 882 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 Q3C1V9 767 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 MAGED4Q96JG8 741 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 TEX13BQ9BXU2 312 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 MPP6Q9NZW5 540 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 RIMS1Q86UR5 1692 aaKnown RBP18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 KLRK1P26718 216 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 ZNF699Q32M78 642 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 ILDR1Q86SU0 546 aaPredicted RBP18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 DCLK2Q8N568 766 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 AGBL3Q8NEM8 1001 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 FAM81AQ8TBF8 368 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 KBTBD4Q9NVX7 518 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 SNX2O60749 519 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 MYBP10242 640 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 GRK2P25098 689 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 TRIM69Q86WT6 500 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 FAM49AQ9H0Q0 323 aaPredicted RBP18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 RSAD1Q9HA92 442 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 STAP1Q9ULZ2 295 aa18.28■□□□□ 0.52
PCDHA13-201ENST00000289272 GPC3P51654 580 aa18.27■□□□□ 0.52
PCDHA13-201ENST00000289272 XIAPP98170 497 aa18.27■□□□□ 0.52
PCDHA13-201ENST00000289272 ITGB3BPQ13352 177 aaPredicted RBP18.27■□□□□ 0.52
PCDHA13-201ENST00000289272 LRRC36Q1X8D7 754 aa18.27■□□□□ 0.52
PCDHA13-201ENST00000289272 ZNF568Q3ZCX4 644 aa18.27■□□□□ 0.52
PCDHA13-201ENST00000289272 POLR3FQ9H1D9 316 aaPredicted RBP18.27■□□□□ 0.52
PCDHA13-201ENST00000289272 ADNPQ9H2P0 1102 aa18.27■□□□□ 0.52
PCDHA13-201ENST00000289272 DCDC2Q9UHG0 476 aa18.27■□□□□ 0.52
PCDHA13-201ENST00000289272 PCDHB2Q9Y5E7 798 aa18.27■□□□□ 0.52
PCDHA13-201ENST00000289272 STIP1P31948 543 aaKnown RBP18.27■□□□□ 0.52
PCDHA13-201ENST00000289272 MICALL2Q8IY33 904 aa18.27■□□□□ 0.52
PCDHA13-201ENST00000289272 LACRTQ9GZZ8 138 aa18.27■□□□□ 0.52
PCDHA13-201ENST00000289272 TUBA8Q9NY65 449 aaPredicted RBP18.27■□□□□ 0.52
PCDHA13-201ENST00000289272 AURKCQ9UQB9 309 aa18.27■□□□□ 0.52
PCDHA13-201ENST00000289272 STARD13Q9Y3M8 1113 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms