RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.61□□□□□ -0.23
ZIC3-201ENST00000287538 ZFATQ9P243 1243 aa13.61□□□□□ -0.23
ZIC3-201ENST00000287538 SNX24Q9Y343 169 aa13.61□□□□□ -0.23
ZIC3-201ENST00000287538 GPR25O00155 361 aa13.61□□□□□ -0.23
ZIC3-201ENST00000287538 CTCFP49711 727 aaPredicted RBP13.61□□□□□ -0.23
ZIC3-201ENST00000287538 TNFAIP2Q03169 654 aa13.61□□□□□ -0.23
ZIC3-201ENST00000287538 ARHGAP1Q07960 439 aa13.61□□□□□ -0.23
ZIC3-201ENST00000287538 ACVR2BQ13705 512 aa13.61□□□□□ -0.23
ZIC3-201ENST00000287538 RNF169Q8NCN4 708 aa13.61□□□□□ -0.23
ZIC3-201ENST00000287538 RNF25Q96BH1 459 aaPredicted RBP13.61□□□□□ -0.23
ZIC3-201ENST00000287538 MS4A4AQ96JQ5 239 aa13.61□□□□□ -0.23
ZIC3-201ENST00000287538 TSC22D3Q99576 134 aa13.61□□□□□ -0.23
ZIC3-201ENST00000287538 NOCTQ9UK39 431 aaKnown RBP13.61□□□□□ -0.23
ZIC3-201ENST00000287538 SMIM24O75264 130 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 SNAI1O95863 264 aaPredicted RBP13.6□□□□□ -0.23
ZIC3-201ENST00000287538 NFICP08651 508 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 ATP2A2P16615 1042 aaKnown RBP13.6□□□□□ -0.23
ZIC3-201ENST00000287538 ILDR2Q71H61 639 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 CENPTQ96BT3 561 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 TLCD1Q96CP7 247 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 ANKRD36BP1Q96IX9 119 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 TINF2Q9BSI4 451 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 INTS9Q9NV88 658 aaKnown RBP13.6□□□□□ -0.23
ZIC3-201ENST00000287538 TCRBV7S2A1N4TA0A589 114 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 LUC7L3O95232 432 aaKnown RBP13.6□□□□□ -0.23
ZIC3-201ENST00000287538 STAG3L1P0CL83 205 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 ALADP13716 330 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 PHKA2P46019 1235 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 SPRYD7Q5W111 196 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 RHOT2Q8IXI1 618 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 PBKQ96KB5 322 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 PARK7Q99497 189 aaKnown RBP13.6□□□□□ -0.23
ZIC3-201ENST00000287538 GOLGA6L10A0A0M3HER8 536 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 HGSO14964 777 aaPredicted RBP13.6□□□□□ -0.23
ZIC3-201ENST00000287538 KRT16P08779 473 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 RARAP10276 462 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 ATF7P17544 494 aaPredicted RBP13.6□□□□□ -0.23
ZIC3-201ENST00000287538 PLTPP55058 493 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 NFX1Q12986 1120 aaKnown RBP13.6□□□□□ -0.23
ZIC3-201ENST00000287538 HOOK3Q86VS8 718 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 ATG4AQ8WYN0 398 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 FBXL18Q96ME1 805 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 CGRRF1Q99675 332 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 CCDC113Q9H0I3 377 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 PCDHB2Q9Y5E7 798 aa13.6□□□□□ -0.23
ZIC3-201ENST00000287538 DNAJC25-GNG10A0A024R161 153 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 LACTBL1A8MY62 500 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 ZBTB42B2RXF5 422 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 AHCYL1O43865 530 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 SHBGP04278 402 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 PYGMP11217 842 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 GNAT1P11488 350 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 SNRPFP62306 86 aaKnown RBP13.59□□□□□ -0.23
ZIC3-201ENST00000287538 TAPT1Q6NXT6 567 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 C7orf31Q8N865 590 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 C18orf8Q96DM3 657 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 PLCD4Q9BRC7 762 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 CDT1Q9H211 546 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 ERVK-5Q9HDB9 667 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 CISHQ9NSE2 258 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 IGKV6D-21A0A0A0MT36 114 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 O00370 1275 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 LIN7AO14910 233 aaPredicted RBP13.59□□□□□ -0.23
ZIC3-201ENST00000287538 FESP07332 822 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 CTSHP09668 335 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 AKAP5P24588 427 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 PAPOLAP51003 745 aaKnown RBP13.59□□□□□ -0.23
ZIC3-201ENST00000287538 RTP1P59025 263 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 PLCB3Q01970 1234 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 GRIK4Q16099 956 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 ATP13A4Q4VNC1 1196 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 ACAD10Q6JQN1 1059 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 MPZL3Q6UWV2 235 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 ATXN2LQ8WWM7 1075 aaKnown RBP13.59□□□□□ -0.23
ZIC3-201ENST00000287538 MAML3Q96JK9 1138 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 NSRP1Q9H0G5 558 aaKnown RBP13.59□□□□□ -0.23
ZIC3-201ENST00000287538 PAPOLBQ9NRJ5 636 aaKnown RBP13.59□□□□□ -0.23
ZIC3-201ENST00000287538 PARP2Q9UGN5 583 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 GRAP2O75791 330 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 C6orf222P0C671 652 aaPredicted RBP13.59□□□□□ -0.23
ZIC3-201ENST00000287538 RFX1P22670 979 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 ATP11AP98196 1134 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 UBA3Q8TBC4 463 aa13.59□□□□□ -0.23
ZIC3-201ENST00000287538 A6NHS1 94 aa13.58□□□□□ -0.24
ZIC3-201ENST00000287538 ACKR2O00590 384 aa13.58□□□□□ -0.24
ZIC3-201ENST00000287538 TNPO2O14787 897 aaKnown RBP13.58□□□□□ -0.24
ZIC3-201ENST00000287538 TLR3O15455 904 aaKnown RBP13.58□□□□□ -0.24
ZIC3-201ENST00000287538 ARF4P18085 180 aaPredicted RBP13.58□□□□□ -0.24
ZIC3-201ENST00000287538 POLR2BP30876 1174 aaKnown RBP13.58□□□□□ -0.24
ZIC3-201ENST00000287538 DYNLT1P63172 113 aa13.58□□□□□ -0.24
ZIC3-201ENST00000287538 ZNF667Q5HYK9 610 aa13.58□□□□□ -0.24
ZIC3-201ENST00000287538 ARMC3Q5W041 872 aa13.58□□□□□ -0.24
ZIC3-201ENST00000287538 JADE1Q6IE81 842 aa13.58□□□□□ -0.24
ZIC3-201ENST00000287538 DNAJB3Q8WWF6 145 aa13.58□□□□□ -0.24
ZIC3-201ENST00000287538 ZNF606Q8WXB4 792 aa13.58□□□□□ -0.24
ZIC3-201ENST00000287538 KIF12Q96FN5 646 aa13.58□□□□□ -0.24
ZIC3-201ENST00000287538 NAF1Q96HR8 494 aaKnown RBP13.58□□□□□ -0.24
ZIC3-201ENST00000287538 HEXIM2Q96MH2 286 aaKnown RBP13.58□□□□□ -0.24
ZIC3-201ENST00000287538 ADPGKQ9BRR6 497 aa13.58□□□□□ -0.24
ZIC3-201ENST00000287538 CDHR5Q9HBB8 845 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms