RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 SAMD15Q9P1V8 674 aa9.56□□□□□ -0.88
CCDC144B-201ENST00000285176 TJP2Q9UDY2 1190 aa9.56□□□□□ -0.88
CCDC144B-201ENST00000285176 ALG6Q9Y672 507 aa9.56□□□□□ -0.88
CCDC144B-201ENST00000285176 MROH7Q68CQ1 1323 aa9.56□□□□□ -0.88
CCDC144B-201ENST00000285176 GPR182O15218 404 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 HEXIM1O94992 359 aaKnown RBP9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 KRT81Q14533 505 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 HGSNATQ68CP4 663 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 CRELD2Q6UXH1 353 aaPredicted RBP9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 TMC2Q8TDI7 906 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 WNT8BQ93098 351 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 PCDHB18PQ96TA0 734 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 OSBPL7Q9BZF2 842 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 DMAC2Q9NW81 257 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 TRPV2Q9Y5S1 764 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 KIAA1217Q5T5P2 1943 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 A0A1W2PQJ5 194 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 SSU72P8A0A1W2PR75 194 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 RAG1P15918 1043 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 ARHGAP25P42331 645 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 MARCKSL1P49006 195 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 GATMP50440 423 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 ADCY1Q08828 1119 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 ATP13A4Q4VNC1 1196 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 NME8Q8N427 588 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 B3GNT5Q9BYG0 378 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 METTL5Q9NRN9 209 aaKnown RBP9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 FAM105AQ9NUU6 356 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 AMACRQ9UHK6 382 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 ZNF148Q9UQR1 794 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 ZSCAN5CA6NGD5 496 aaPredicted RBP9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 DCDC2CA8MYV0 355 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 FAM155AB1AL88 458 aaPredicted RBP9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 CREB3O43889 395 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 LGR5O75473 907 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 KRT3P12035 628 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 KRT10P13645 584 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 DENND2CQ68D51 928 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 DDX42Q86XP3 938 aaKnown RBP eCLIP9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 CCDC89Q8N998 374 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 FBF1Q8TES7 1133 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 ATG4AQ8WYN0 398 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 RFFLQ8WZ73 363 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 SEPT5Q99719 369 aaPredicted RBP9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 PAAF1Q9BRP4 392 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 TTYH3Q9C0H2 523 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 TMEM134Q9H6X4 195 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 SLC45A1Q9Y2W3 748 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 SMIM28A0A1B0GU29 152 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 TBKBP1A7MCY6 615 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 VNN1O95497 513 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 KRT15P19012 456 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 ABCD1P33897 745 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 TAF6P49848 677 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 MAP3K7CLP57077 242 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 CAP1Q01518 475 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 HIC1Q14526 733 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 MDH1BQ5I0G3 518 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 METTL23Q86XA0 190 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 C18orf8Q96DM3 657 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 MRPL45Q9BRJ2 306 aaKnown RBP9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 C10orf88Q9H8K7 445 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 SIX2Q9NPC8 291 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 PPANQ9NQ55 473 aaKnown RBP9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 TSPAN16Q9UKR8 245 aa9.55□□□□□ -0.88
CCDC144B-201ENST00000285176 SBF1O95248 1867 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 CCDC151A5D8V7 595 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 MCF2P10911 925 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 GRIK1P39086 918 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 SNX16P57768 344 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 RPL7AP62424 266 aaKnown RBP9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 CDR2Q01850 454 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 MAMDC4Q6UXC1 1216 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 FAM228AQ86W67 206 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 SLC2A14Q8TDB8 520 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 EDEM1Q92611 657 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 ZMAT2Q96NC0 199 aaKnown RBP9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 RSAD1Q9HA92 442 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 UBQLN1Q9UMX0 589 aaKnown RBP9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 GNEQ9Y223 722 aaKnown RBP9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 MYH15Q9Y2K3 1946 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 COL11A1P12107 1806 aaPredicted RBP9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 F8W810 466 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 GOLGA8MH3BSY2 632 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 CLCNKBP51801 687 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 CLUL1Q15846 466 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 ZC3H18Q86VM9 953 aaKnown RBP9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 SLC9A9Q8IVB4 645 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 ADGRF2Q8IZF7 708 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 MFSD14AQ96MC6 490 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 TSPYL2Q9H2G4 693 aaPredicted RBP9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 FZD8Q9H461 694 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 DPEP3Q9H4B8 488 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 CPSF3Q9UKF6 684 aaKnown RBP9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 DOCK1Q14185 1865 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 KPNA7A9QM74 516 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 RTN2O75298 545 aa9.54□□□□□ -0.88
CCDC144B-201ENST00000285176 IL18RAPO95256 599 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms