RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ZNF365Q70YC5 407 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 RCOR2Q8IZ40 523 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 LRRC8CQ8TDW0 803 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 ATG4AQ8WYN0 398 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 GMLQ99445 158 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 DENND2DQ9H6A0 471 aaPredicted RBP10.95□□□□□ -0.66
SKA1-201ENST00000285116 TLE6Q9H808 572 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 KMT5AQ9NQR1 393 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 IRAK4Q9NWZ3 460 aa10.95□□□□□ -0.66
SKA1-201ENST00000285116 ZNF70Q9UC06 446 aaPredicted RBP10.95□□□□□ -0.66
SKA1-201ENST00000285116 GOLGA8IPA6NC78 632 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 GOLGA8JA6NMD2 632 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 DNALI1O14645 258 aaPredicted RBP10.94□□□□□ -0.66
SKA1-201ENST00000285116 MAFGO15525 162 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 EXTL3O43909 919 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 T-ENOLP0DO92 83 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 RALAP11233 206 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 MARK3P27448 753 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 EPHB2P29323 1055 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 NOMO3P69849 1222 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 MORF4L2Q15014 288 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 PGM5Q15124 567 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 ZRSR2Q15696 482 aaKnown RBP10.94□□□□□ -0.66
SKA1-201ENST00000285116 EAPPQ56P03 285 aaPredicted RBP10.94□□□□□ -0.66
SKA1-201ENST00000285116 SRRM1Q8IYB3 904 aaKnown RBP10.94□□□□□ -0.66
SKA1-201ENST00000285116 MCPH1Q8NEM0 835 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 TTC8Q8TAM2 541 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 RBM41Q96IZ5 413 aaKnown RBP10.94□□□□□ -0.66
SKA1-201ENST00000285116 FRMD8P1Q9BZ68 369 aaPredicted RBP10.94□□□□□ -0.66
SKA1-201ENST00000285116 NMRK1Q9NWW6 199 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 ARHGAP28Q9P2N2 729 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 PHTF1Q9UMS5 762 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 KIAA1217Q5T5P2 1943 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 FOXO6A8MYZ6 492 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 DDX39AO00148 427 aaKnown RBP10.94□□□□□ -0.66
SKA1-201ENST00000285116 LIASO43766 372 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 CCNE2O96020 404 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 TSHRP16473 764 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 PTPN4P29074 926 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 CETN2P41208 172 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 WDR4P57081 412 aaKnown RBP10.94□□□□□ -0.66
SKA1-201ENST00000285116 OCRLQ01968 901 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 MAMLD1Q13495 774 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 PDK4Q16654 411 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 XKR9Q5GH70 373 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 FAM102BQ5T8I3 360 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 RNF220Q5VTB9 566 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 ANO5Q75V66 913 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 ABRAQ8N0Z2 381 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 EZH1Q92800 747 aaPredicted RBP10.94□□□□□ -0.66
SKA1-201ENST00000285116 GPRASP2Q96D09 838 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 DTNBP1Q96EV8 351 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 FGD4Q96M96 766 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 AGBL1Q96MI9 1066 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 SLC38A10Q9HBR0 1119 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 GPRC5CQ9NQ84 441 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 SHOC2Q9UQ13 582 aa10.94□□□□□ -0.66
SKA1-201ENST00000285116 SIGLEC16A6NMB1 481 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 NFIBO00712 420 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 ENTPD5O75356 428 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 C4BPAP04003 597 aaKnown RBP10.93□□□□□ -0.66
SKA1-201ENST00000285116 ASNSP08243 561 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 CCDC6Q16204 474 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 FAM43BQ6ZT52 329 aaPredicted RBP10.93□□□□□ -0.66
SKA1-201ENST00000285116 ARHGAP22Q7Z5H3 698 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 SESTD1Q86VW0 696 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 ALLCQ8N6M5 410 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 NKD2Q969F2 451 aaPredicted RBP10.93□□□□□ -0.66
SKA1-201ENST00000285116 CCDC127Q96BQ5 260 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 RBM15Q96T37 977 aaKnown RBP eCLIP10.93□□□□□ -0.66
SKA1-201ENST00000285116 CYLDQ9NQC7 956 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 TOPORSQ9NS56 1045 aaPredicted RBP10.93□□□□□ -0.66
SKA1-201ENST00000285116 IP6K2Q9UHH9 426 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 LNPEPQ9UIQ6 1025 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 EFR3BQ9Y2G0 817 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 ALOX15BO15296 676 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 KRT5P13647 590 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 TBXAS1P24557 533 aaPredicted RBP10.93□□□□□ -0.66
SKA1-201ENST00000285116 POLE2P56282 527 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 SPARCL1Q14515 664 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 ZNF449Q6P9G9 518 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 UBR7Q8N806 425 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 B4GALNT2Q8NHY0 566 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 BSNDQ8WZ55 320 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 ZNF516Q92618 1163 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 EPAS1Q99814 870 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 FAM192AQ9GZU8 254 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 FBXO28Q9NVF7 368 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 PIM2Q9P1W9 311 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 TBK1Q9UHD2 729 aa10.93□□□□□ -0.66
SKA1-201ENST00000285116 RASA4BC9J798 803 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 RASA4O43374 803 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 DGAT1O75907 488 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 ZNF132P52740 706 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 TAS2R40P59535 323 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 DNAJC3Q13217 504 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 RCN2Q14257 317 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 TBC1D25Q3MII6 688 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 WDR44Q5JSH3 913 aa10.92□□□□□ -0.66
SKA1-201ENST00000285116 RSBN1LQ6PCB5 846 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms