RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 ZNF606Q8WXB4 792 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 PUF60Q9UHX1 559 aaKnown RBP20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 KIAA1257Q9ULG3 409 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 PCDHB8Q9UN66 801 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 TIMM13Q9Y5L4 95 aaPredicted RBP20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 THAP12O43422 761 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 IPO7O95373 1038 aaKnown RBP20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 TYMPP19971 482 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 PBX3P40426 434 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 KRT83P78385 493 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 FMO1Q01740 532 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 CYP27A1Q02318 531 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 SPA17Q15506 151 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 OSTM1Q86WC4 334 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 METTL23Q86XA0 190 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 HERC6Q8IVU3 1022 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 CRYBG2Q8N1P7 616 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 HEXIM2Q96MH2 286 aaKnown RBP20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 ZBED2Q9BTP6 218 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 DNAI2Q9GZS0 605 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 INSL6Q9Y581 213 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 PTPRSQ13332 1948 aa20.12■□□□□ 0.81
PDLIM3-202ENST00000284770 NT5C1B-RDH14C9J2C7 533 aa20.12■□□□□ 0.81
PDLIM3-202ENST00000284770 PDGFRBP09619 1106 aa20.12■□□□□ 0.81
PDLIM3-202ENST00000284770 VDRP11473 427 aa20.12■□□□□ 0.81
PDLIM3-202ENST00000284770 CD19P15391 556 aa20.12■□□□□ 0.81
PDLIM3-202ENST00000284770 ATP2A2P16615 1042 aaKnown RBP20.12■□□□□ 0.81
PDLIM3-202ENST00000284770 MAGEA10P43363 369 aaPredicted RBP20.12■□□□□ 0.81
PDLIM3-202ENST00000284770 SPOUT1Q5T280 376 aaKnown RBP20.12■□□□□ 0.81
PDLIM3-202ENST00000284770 ACOT1Q86TX2 421 aa20.12■□□□□ 0.81
PDLIM3-202ENST00000284770 TFAP2BQ92481 460 aa20.12■□□□□ 0.81
PDLIM3-202ENST00000284770 ZSWIM1Q9BR11 485 aa20.12■□□□□ 0.81
PDLIM3-202ENST00000284770 SEPT11Q9NVA2 429 aaKnown RBP20.12■□□□□ 0.81
PDLIM3-202ENST00000284770 DDX43Q9NXZ2 648 aaKnown RBP20.12■□□□□ 0.81
PDLIM3-202ENST00000284770 NAGPAQ9UK23 515 aa20.12■□□□□ 0.81
PDLIM3-202ENST00000284770 MRPL42Q9Y6G3 142 aaKnown RBP20.12■□□□□ 0.81
PDLIM3-202ENST00000284770 CARNS1A5YM72 827 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 HCRTO43612 131 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 BRD2P25440 801 aaKnown RBP20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 PTPN14Q15678 1187 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 KCNT2Q6UVM3 1135 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 ZNF662Q6ZS27 426 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 TMEM173Q86WV6 379 aaPredicted RBP20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 TNIP3Q96KP6 325 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 PCDHB18PQ96TA0 734 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 SF3B1O75533 1304 aaKnown RBP eCLIP20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 SYN3O14994 580 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 MED7O43513 233 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 LAG3P18627 525 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 ARHGAP25P42331 645 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 ELAVL2Q12926 359 aaKnown RBP20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 SGO2Q562F6 1265 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 FUT10Q6P4F1 479 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 ALKBH5Q6P6C2 394 aaKnown RBP20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 PALB2Q86YC2 1186 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 ZNF558Q96NG5 402 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 RAD9AQ99638 391 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 GPR62Q9BZJ7 368 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 DPEP3Q9H4B8 488 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 NENFQ9UMX5 172 aa20.11■□□□□ 0.81
PDLIM3-202ENST00000284770 ABL1P00519 1130 aa20.1■□□□□ 0.81
PDLIM3-202ENST00000284770 CCDC122Q5T0U0 273 aa20.1■□□□□ 0.81
PDLIM3-202ENST00000284770 OVOS1Q6IE37 1185 aa20.1■□□□□ 0.81
PDLIM3-202ENST00000284770 C12orf29Q8N999 325 aa20.1■□□□□ 0.81
PDLIM3-202ENST00000284770 IGSF21Q96ID5 467 aa20.1■□□□□ 0.81
PDLIM3-202ENST00000284770 PDCL3Q9H2J4 239 aa20.1■□□□□ 0.81
PDLIM3-202ENST00000284770 LZTFL1Q9NQ48 299 aa20.1■□□□□ 0.81
PDLIM3-202ENST00000284770 PCDHGC3Q9UN70 934 aa20.1■□□□□ 0.81
PDLIM3-202ENST00000284770 PCDHA13Q9Y5I0 950 aa20.1■□□□□ 0.81
PDLIM3-202ENST00000284770 RCCD1A6NED2 376 aa20.09■□□□□ 0.81
PDLIM3-202ENST00000284770 CFHP08603 1231 aa20.09■□□□□ 0.81
PDLIM3-202ENST00000284770 GZMAP12544 262 aa20.09■□□□□ 0.81
PDLIM3-202ENST00000284770 TKTP29401 623 aaKnown RBP20.09■□□□□ 0.81
PDLIM3-202ENST00000284770 VAV2P52735 878 aa20.09■□□□□ 0.81
PDLIM3-202ENST00000284770 YWHAHQ04917 246 aaPredicted RBP20.09■□□□□ 0.81
PDLIM3-202ENST00000284770 CNGA2Q16280 664 aa20.09■□□□□ 0.81
PDLIM3-202ENST00000284770 C10orf76Q5T2E6 689 aa20.09■□□□□ 0.81
PDLIM3-202ENST00000284770 FAM171A1Q5VUB5 890 aa20.09■□□□□ 0.81
PDLIM3-202ENST00000284770 TRIM72Q6ZMU5 477 aa20.09■□□□□ 0.81
PDLIM3-202ENST00000284770 FIBCD1Q8N539 461 aa20.09■□□□□ 0.81
PDLIM3-202ENST00000284770 B3GALNT2Q8NCR0 500 aa20.09■□□□□ 0.81
PDLIM3-202ENST00000284770 BCL7CQ8WUZ0 217 aaPredicted RBP20.09■□□□□ 0.81
PDLIM3-202ENST00000284770 RTP3Q9BQQ7 232 aa20.09■□□□□ 0.81
PDLIM3-202ENST00000284770 O00370 1275 aa20.08■□□□□ 0.81
PDLIM3-202ENST00000284770 OAZ2O95190 189 aa20.08■□□□□ 0.81
PDLIM3-202ENST00000284770 EFEMP2O95967 443 aa20.08■□□□□ 0.81
PDLIM3-202ENST00000284770 CYP1A1P04798 512 aaPredicted RBP20.08■□□□□ 0.81
PDLIM3-202ENST00000284770 TNNT1P13805 278 aa20.08■□□□□ 0.81
PDLIM3-202ENST00000284770 ACAT1P24752 427 aaKnown RBP20.08■□□□□ 0.81
PDLIM3-202ENST00000284770 PCSK1P29120 753 aa20.08■□□□□ 0.81
PDLIM3-202ENST00000284770 MAGEA1P43355 309 aa20.08■□□□□ 0.81
PDLIM3-202ENST00000284770 STILQ15468 1287 aa20.08■□□□□ 0.81
PDLIM3-202ENST00000284770 C9orf50Q5SZB4 431 aa20.08■□□□□ 0.81
PDLIM3-202ENST00000284770 THEM5Q8N1Q8 247 aa20.08■□□□□ 0.81
PDLIM3-202ENST00000284770 COLGALT1Q8NBJ5 622 aa20.08■□□□□ 0.81
PDLIM3-202ENST00000284770 SP7Q8TDD2 431 aaPredicted RBP20.08■□□□□ 0.81
PDLIM3-202ENST00000284770 ACBD6Q9BR61 282 aa20.08■□□□□ 0.81
PDLIM3-202ENST00000284770 CDH9Q9ULB4 789 aa20.08■□□□□ 0.81
PDLIM3-202ENST00000284770 TFR2Q9UP52 801 aa20.08■□□□□ 0.81
PDLIM3-202ENST00000284770 TLL1O43897 1013 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms