RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 SCINQ9Y6U3 715 aa6.4□□□□□ -1.39
TNFSF4-201ENST00000281834 FAM187AA6NFU0 413 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 PODXLO00592 558 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 FAM189A1O60320 539 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 BANF1O75531 89 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 PIGRP01833 764 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 MYL3P08590 195 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 CD48P09326 243 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 CTSHP09668 335 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 MMP8P22894 467 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 LSP1P33241 339 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 ABCD1P33897 745 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 ACVR2BQ13705 512 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 SMAD1Q15797 465 aaKnown RBP6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 SLC10A6Q3KNW5 377 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 SH3PXD2AQ5TCZ1 1133 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 RUFY4Q6ZNE9 571 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 ZNF677Q86XU0 584 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 OR6B3Q8NGW1 331 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 NPLOC4Q8TAT6 608 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 DYDC1Q8WWB3 177 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 DNAJB3Q8WWF6 145 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 C18orf25Q96B23 403 aaPredicted RBP6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 XYLT2Q9H1B5 865 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 FZD8Q9H461 694 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 PDZD7Q9H5P4 517 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 TMBIM4Q9HC24 238 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 ZDHHC18Q9NUE0 388 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 PRMT7Q9NVM4 692 aaPredicted RBP6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 GPATCH2LQ9NWQ4 482 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 CYTH4Q9UIA0 394 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 PIN4Q9Y237 131 aaKnown RBP6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 TULP2O00295 520 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 EBAG9O00559 213 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 EIF3HO15372 352 aaKnown RBP eCLIP6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 IVLP07476 585 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 HSPA6P17066 643 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 NDST1P52848 882 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 TNFAIP2Q03169 654 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 GPS1Q13098 491 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 P3H1Q32P28 736 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 TSHZ1Q6ZSZ6 1077 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 ZC3H18Q86VM9 953 aaKnown RBP6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 WDTC1Q8N5D0 677 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 C2orf69Q8N8R5 385 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 NETO2Q8NC67 525 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 RUBCNQ92622 972 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 PIWIL1Q96J94 861 aaKnown RBP6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 FAM81BQ96LP2 452 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 PTPN18Q99952 460 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 TINF2Q9BSI4 451 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 EIF2AQ9BY44 585 aaKnown RBP6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 TSPYL1Q9H0U9 437 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 NXF3Q9H4D5 531 aaKnown RBP6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 PSD3Q9NYI0 1048 aa6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 RRP15Q9Y3B9 282 aaKnown RBP6.39□□□□□ -1.39
TNFSF4-201ENST00000281834 HMGB1P1B2RPK0 211 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 POC1B-GALNT4F8VUJ3 575 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 ABLIM1O14639 778 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 LGR5O75473 907 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 CALB1P05937 261 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 MYBL1P10243 752 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 ADORA2BP29275 332 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 ARSEP51690 589 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 GTF2A2P52657 109 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 CLDN10P78369 228 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 PTPN11Q06124 597 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 SIX1Q15475 284 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 TAF1CQ15572 869 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 PPP2R5EQ16537 467 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 CCDC142Q17RM4 750 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 C15orf59Q2T9L4 293 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 PPP6R3Q5H9R7 873 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 IZUMO3Q5VZ72 239 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 CDCA2Q69YH5 1023 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 MTHFD1LQ6UB35 978 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 MSL3Q8N5Y2 521 aaKnown RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 ZC3H15Q8WU90 426 aaKnown RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 MAML3Q96JK9 1138 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 DCLK3Q9C098 648 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 ELOVL4Q9GZR5 314 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 PABPC3Q9H361 631 aaKnown RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 CDC42EP4Q9H3Q1 356 aaKnown RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 AVENQ9NQS1 362 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 DPP3Q9NY33 737 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 IP6K2Q9UHH9 426 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 IGKV6-21A0A0C4DH24 114 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 RASGRF2O14827 1237 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 CST8O60676 142 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 PPFIA4O75335 1185 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 CYP2C9P11712 490 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 CREB1P16220 341 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 LIG3P49916 1009 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 ZNF157P51786 506 aaPredicted RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 RABGGTBP53611 331 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 HADHBP55084 474 aaKnown RBP6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 ZNF252P-AS1Q0IIN9 211 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 DGKDQ16760 1214 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 LDLRAD1Q5T700 205 aa6.38□□□□□ -1.39
TNFSF4-201ENST00000281834 PLEKHA7Q6IQ23 1121 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms