RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 FAM193BQ96PV7 902 aaPredicted RBP9.49□□□□□ -0.89
SEC16A-201ENST00000277537 DHX35Q9H5Z1 703 aaKnown RBP9.49□□□□□ -0.89
SEC16A-201ENST00000277537 TIMM13Q9Y5L4 95 aaPredicted RBP9.49□□□□□ -0.89
SEC16A-201ENST00000277537 PTPRJQ12913 1337 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 MSCO60682 206 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 ASS1P00966 412 aaKnown RBP9.49□□□□□ -0.89
SEC16A-201ENST00000277537 KRT7P08729 469 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 GBP1P32455 592 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 TTC31Q49AM3 519 aaPredicted RBP9.49□□□□□ -0.89
SEC16A-201ENST00000277537 DENND1BQ6P3S1 775 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 SHCBP1Q8NEM2 672 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 APPL2Q8NEU8 664 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 TMEM176AQ96HP8 235 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 GPBP1L1Q9HC44 474 aaPredicted RBP9.49□□□□□ -0.89
SEC16A-201ENST00000277537 NOCTQ9UK39 431 aaKnown RBP9.49□□□□□ -0.89
SEC16A-201ENST00000277537 TNFSF13BQ9Y275 285 aa9.49□□□□□ -0.89
SEC16A-201ENST00000277537 MCF2P10911 925 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 THPOP40225 353 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 PSMC4P43686 418 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 WNT7BP56706 349 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 ZNF200P98182 395 aaPredicted RBP9.48□□□□□ -0.89
SEC16A-201ENST00000277537 SLC29A2Q14542 456 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 TMED2Q15363 201 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 KYNUQ16719 465 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 P3H1Q32P28 736 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 DUSP28Q4G0W2 176 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 C12orf29Q8N999 325 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 CCDC63Q8NA47 563 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 CABS1Q96KC9 395 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 SGIP1Q9BQI5 828 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 ERVK-5Q9HDB9 667 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 CHST7Q9NS84 486 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 RRP15Q9Y3B9 282 aaKnown RBP9.48□□□□□ -0.89
SEC16A-201ENST00000277537 TCRBV7S2A1N4TA0A589 114 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 MAP2K7O14733 419 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 CSPG5O95196 566 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 VNN1O95497 513 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 SMIM10L2AP0DMW4 78 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 SMIM10L2BP0DMW5 78 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 GJA5P36382 358 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 GNL1P36915 607 aaPredicted RBP9.48□□□□□ -0.89
SEC16A-201ENST00000277537 LIG3P49916 1009 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 ITIH3Q06033 890 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 PIGHQ14442 188 aaPredicted RBP9.48□□□□□ -0.89
SEC16A-201ENST00000277537 ABI1Q8IZP0 508 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 BBOF1Q8ND07 529 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 PPTC7Q8NI37 304 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 P3H4Q92791 437 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 INTS9Q9NV88 658 aaKnown RBP9.48□□□□□ -0.89
SEC16A-201ENST00000277537 GPATCH2LQ9NWQ4 482 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 PCDHA3Q9Y5H8 950 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 CREB3O43889 395 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 RECQL4O94761 1208 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 ZBED1O96006 694 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 ACAT1P24752 427 aaKnown RBP9.48□□□□□ -0.89
SEC16A-201ENST00000277537 ARHGAP1Q07960 439 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 BYSLQ13895 437 aaKnown RBP9.48□□□□□ -0.89
SEC16A-201ENST00000277537 ZKSCAN8Q15776 578 aaPredicted RBP9.48□□□□□ -0.89
SEC16A-201ENST00000277537 CCL14Q16627 93 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 FAM110CQ1W6H9 321 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 PRUNE1Q86TP1 453 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 RCOR2Q8IZ40 523 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 HASPINQ8TF76 798 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 AENQ8WTP8 325 aaKnown RBP9.48□□□□□ -0.89
SEC16A-201ENST00000277537 SNF8Q96H20 258 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 ATP6V1G3Q96LB4 118 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 KATNAL1Q9BW62 490 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 C10orf88Q9H8K7 445 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 SAMD15Q9P1V8 674 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 SAE1Q9UBE0 346 aaPredicted RBP9.48□□□□□ -0.89
SEC16A-201ENST00000277537 TSPAN16Q9UKR8 245 aa9.48□□□□□ -0.89
SEC16A-201ENST00000277537 EXOC1LA0A1B0GW35 172 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 BTNL10A8MVZ5 291 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 HMGB1P1B2RPK0 211 aaPredicted RBP9.47□□□□□ -0.89
SEC16A-201ENST00000277537 EIF4BP23588 611 aaKnown RBP9.47□□□□□ -0.89
SEC16A-201ENST00000277537 ATP5DP30049 168 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 STX2P32856 288 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 ITGA8P53708 1063 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 NOMO3P69849 1222 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 MAP2K5Q13163 448 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 MAMLD1Q13495 774 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 FSCN1Q16658 493 aaKnown RBP9.47□□□□□ -0.89
SEC16A-201ENST00000277537 KYAT1Q16773 422 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 EFCAB13Q8IY85 973 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 TMEM130Q8N3G9 435 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 FBXL18Q96ME1 805 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 ZNF560Q96MR9 790 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 COQ4Q9Y3A0 265 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 NCANO14594 1321 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 MANSC4A6NHS7 340 aaPredicted RBP9.47□□□□□ -0.89
SEC16A-201ENST00000277537 CYP1A2P05177 515 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 MMP3P08254 477 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 RFC1P35251 1148 aaPredicted RBP9.47□□□□□ -0.89
SEC16A-201ENST00000277537 ARL4AP40617 200 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 PSEN2P49810 448 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 BCAR1P56945 870 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 LONRF1Q17RB8 773 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 SLC27A1Q6PCB7 646 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 CCDC121Q6ZUS5 278 aa9.47□□□□□ -0.89
SEC16A-201ENST00000277537 ANKMY2Q8IV38 441 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms