RNA–Protein interactions for RNA: ENST00000272930.8

UBE2F-201, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2F, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-201ENST00000272930 NUDT17P0C025 328 aa21.38■■□□□ 1.01
UBE2F-201ENST00000272930 PMS2P54278 862 aa21.38■■□□□ 1.01
UBE2F-201ENST00000272930 EIF3BP55884 814 aaKnown RBP21.38■■□□□ 1.01
UBE2F-201ENST00000272930 CCNG2Q16589 344 aa21.38■■□□□ 1.01
UBE2F-201ENST00000272930 CYP4A22Q5TCH4 519 aa21.38■■□□□ 1.01
UBE2F-201ENST00000272930 TMEM176AQ96HP8 235 aa21.38■■□□□ 1.01
UBE2F-201ENST00000272930 CAPS2Q9BXY5 557 aa21.38■■□□□ 1.01
UBE2F-201ENST00000272930 WHRNQ9P202 907 aa21.38■■□□□ 1.01
UBE2F-201ENST00000272930 HMGXB4Q9UGU5 601 aa21.38■■□□□ 1.01
UBE2F-201ENST00000272930 FEZ2Q9UHY8 353 aaPredicted RBP21.38■■□□□ 1.01
UBE2F-201ENST00000272930 R3HDM2Q9Y2K5 976 aaKnown RBP21.38■■□□□ 1.01
UBE2F-201ENST00000272930 SCN1AP35498 2009 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 A6NNZ2 444 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 DYNC1LI2O43237 492 aaPredicted RBP21.37■■□□□ 1.01
UBE2F-201ENST00000272930 TCF4P15884 667 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 SSR1P43307 286 aaKnown RBP21.37■■□□□ 1.01
UBE2F-201ENST00000272930 CDC42EP1Q00587 391 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 MAP2K5Q13163 448 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 SNX1Q13596 522 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 PTK6Q13882 451 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 KIZQ2M2Z5 673 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 TUBB8Q3ZCM7 444 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 LRRC31Q6UY01 552 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 ANKS1BQ7Z6G8 1248 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 RCOR2Q8IZ40 523 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 ATL2Q8NHH9 583 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 RBM41Q96IZ5 413 aaKnown RBP21.37■■□□□ 1.01
UBE2F-201ENST00000272930 HEMGNQ9BXL5 484 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 RRAGCQ9HB90 399 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 DPP3Q9NY33 737 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 CPA4Q9UI42 421 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 AGAP1Q9UPQ3 857 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 NRCAMQ92823 1304 aa21.37■■□□□ 1.01
UBE2F-201ENST00000272930 TRIP12Q14669 1992 aaPredicted RBP21.36■■□□□ 1.01
UBE2F-201ENST00000272930 F8VP50 259 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 GPR32O75388 356 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 NR1D1P20393 614 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 HNRNPH2P55795 449 aaKnown RBP21.36■■□□□ 1.01
UBE2F-201ENST00000272930 RBP5P82980 135 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 INCA1Q0VD86 236 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 NFX1Q12986 1120 aaKnown RBP21.36■■□□□ 1.01
UBE2F-201ENST00000272930 CST9Q5W186 159 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 KAT2BQ92831 832 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 MBLAC1A4D2B0 266 aaPredicted RBP21.36■■□□□ 1.01
UBE2F-201ENST00000272930 SIGLEC16A6NMB1 481 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 TP73O15350 636 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 SMIM10L2AP0DMW4 78 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 SMIM10L2BP0DMW5 78 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 FGFR4P22455 802 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 HOXA11P31270 313 aaPredicted RBP21.36■■□□□ 1.01
UBE2F-201ENST00000272930 CETN2P41208 172 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 IRAK1P51617 712 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 DNAJC21Q5F1R6 531 aaKnown RBP21.36■■□□□ 1.01
UBE2F-201ENST00000272930 AGBL2Q5U5Z8 902 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 SLITRK1Q96PX8 696 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 GCOM2Q9BZD3 368 aaPredicted RBP21.36■■□□□ 1.01
UBE2F-201ENST00000272930 NEU2Q9Y3R4 380 aa21.36■■□□□ 1.01
UBE2F-201ENST00000272930 GRIN2DO15399 1336 aa21.35■■□□□ 1.01
UBE2F-201ENST00000272930 GAS8O95995 478 aa21.35■■□□□ 1.01
UBE2F-201ENST00000272930 IVDP26440 423 aa21.35■■□□□ 1.01
UBE2F-201ENST00000272930 GJC1P36383 396 aa21.35■■□□□ 1.01
UBE2F-201ENST00000272930 CALCOCO2Q13137 446 aa21.35■■□□□ 1.01
UBE2F-201ENST00000272930 ATP13A4Q4VNC1 1196 aa21.35■■□□□ 1.01
UBE2F-201ENST00000272930 PRAMEF19Q5SWL8 479 aa21.35■■□□□ 1.01
UBE2F-201ENST00000272930 FNIP1Q8TF40 1166 aa21.35■■□□□ 1.01
UBE2F-201ENST00000272930 RNF25Q96BH1 459 aaPredicted RBP21.35■■□□□ 1.01
UBE2F-201ENST00000272930 PLEKHA5Q9HAU0 1116 aa21.35■■□□□ 1.01
UBE2F-201ENST00000272930 WDR35Q9P2L0 1181 aa21.35■■□□□ 1.01
UBE2F-201ENST00000272930 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.35■■□□□ 1.01
UBE2F-201ENST00000272930 DERAQ9Y315 318 aa21.35■■□□□ 1.01
UBE2F-201ENST00000272930 SMIM35A0A1B0GVV1 85 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 ZNF865P0CJ78 1059 aaPredicted RBP21.34■■□□□ 1.01
UBE2F-201ENST00000272930 VDRP11473 427 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 PTPN7P35236 360 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 COPS2P61201 443 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 ORC1Q13415 861 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 SLMAPQ14BN4 828 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 PCBP1Q15365 356 aaKnown RBP eCLIP21.34■■□□□ 1.01
UBE2F-201ENST00000272930 APBB1IPQ7Z5R6 666 aaPredicted RBP21.34■■□□□ 1.01
UBE2F-201ENST00000272930 TTC39CQ8N584 583 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 KIF12Q96FN5 646 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 CPXM1Q96SM3 734 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 FLRT1Q9NZU1 646 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 TJP2Q9UDY2 1190 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 BARX2Q9UMQ3 279 aaPredicted RBP21.34■■□□□ 1.01
UBE2F-201ENST00000272930 MICAL2O94851 1124 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 HMGCRP04035 888 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 KRT3P12035 628 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 ITIH2P19823 946 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 RFC1P35251 1148 aaPredicted RBP21.34■■□□□ 1.01
UBE2F-201ENST00000272930 CNGA2Q16280 664 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 SLC27A1Q6PCB7 646 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 RHBDF2Q6PJF5 856 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 FAM49AQ9H0Q0 323 aaPredicted RBP21.34■■□□□ 1.01
UBE2F-201ENST00000272930 ASIC3Q9UHC3 531 aa21.34■■□□□ 1.01
UBE2F-201ENST00000272930 IGF2BP3O00425 579 aaKnown RBP eCLIP21.33■■□□□ 1.01
UBE2F-201ENST00000272930 NPTXRO95502 500 aa21.33■■□□□ 1.01
UBE2F-201ENST00000272930 KRT1P04264 644 aa21.33■■□□□ 1.01
UBE2F-201ENST00000272930 IVLP07476 585 aa21.33■■□□□ 1.01
UBE2F-201ENST00000272930 RARGP13631 454 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms