RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 ZFPM1Q8IX07 1006 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 IGDCC4Q8TDY8 1250 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 RMDN1Q96DB5 314 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 FANCFQ9NPI8 374 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 CICQ96RK0 1608 aaPredicted RBP8.19□□□□□ -1.1
USP3-201ENST00000268049 SHPRHQ149N8 1683 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 SPDYE5A6NIY4 337 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 LAMTOR5O43504 91 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 AOC2O75106 756 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 WBP4O75554 376 aaKnown RBP8.19□□□□□ -1.1
USP3-201ENST00000268049 BLVRAP53004 296 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 C2orf54Q08AI8 447 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 GRIK5Q16478 980 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 JADE1Q6IE81 842 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 TMEM154Q6P9G4 183 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 MTSS1LQ765P7 747 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 ENOSF1Q7L5Y1 443 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 ZNF784Q8NCA9 323 aaPredicted RBP8.19□□□□□ -1.1
USP3-201ENST00000268049 HIC2Q96JB3 615 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 SF3B1O75533 1304 aaKnown RBP eCLIP8.19□□□□□ -1.12e-8■■■■■ 205.3
USP3-201ENST00000268049 TRPM3Q9HCF6 1732 aaPredicted RBP8.19□□□□□ -1.1
USP3-201ENST00000268049 APOA1P02647 267 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 GGCXP38435 758 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 RPIAP49247 311 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 PRKCEQ02156 737 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 TGM3Q08188 693 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 CACNB2Q08289 660 aaPredicted RBP8.19□□□□□ -1.1
USP3-201ENST00000268049 ZNF284Q2VY69 593 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 NUGGCQ68CJ6 796 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 ADCK2Q7Z695 626 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 JAMLQ86YT9 394 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 GPIHBP1Q8IV16 184 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 UNC45BQ8IWX7 931 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 TRIM42Q8IWZ5 723 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 GMCL1P1Q8NEA9 526 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 DDI1Q8WTU0 396 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 ACDQ96AP0 544 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 CCDC124Q96CT7 223 aaKnown RBP8.19□□□□□ -1.1
USP3-201ENST00000268049 PAWRQ96IZ0 340 aaKnown RBP8.19□□□□□ -1.1
USP3-201ENST00000268049 MAP3K14Q99558 947 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 RIT2Q99578 217 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 RSAD1Q9HA92 442 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 ELOVL2Q9NXB9 296 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 WARS2Q9UGM6 360 aaKnown RBP8.19□□□□□ -1.1
USP3-201ENST00000268049 AGAP1Q9UPQ3 857 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 ATP8A1Q9Y2Q0 1164 aa8.19□□□□□ -1.1
USP3-201ENST00000268049 H3BM21 787 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 IRF6O14896 467 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 GYG2O15488 501 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 ELNP15502 786 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 ITGAXP20702 1163 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 CASP6P55212 293 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 PNOCQ13519 176 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 GMCL1Q96IK5 515 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 CCDC3Q9BQI4 270 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 POLR3CQ9BUI4 534 aaPredicted RBP8.18□□□□□ -1.1
USP3-201ENST00000268049 BHMT2Q9H2M3 363 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 C10orf88Q9H8K7 445 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 TLR8Q9NR97 1041 aaKnown RBP8.18□□□□□ -1.1
USP3-201ENST00000268049 FAM207AQ9NSI2 230 aaPredicted RBP8.18□□□□□ -1.1
USP3-201ENST00000268049 SAGE1Q9NXZ1 904 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 RBAKQ9NYW8 714 aaPredicted RBP8.18□□□□□ -1.1
USP3-201ENST00000268049 PCDHAC2Q9Y5I4 1007 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 TCRBV5S4A2TA0A5A2 114 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 NVLO15381 856 aaKnown RBP8.18□□□□□ -1.1
USP3-201ENST00000268049 SNX2O60749 519 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 SUPT3HO75486 399 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 UBE4BO95155 1302 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 ASGR1P07306 291 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 SMARCA1P28370 1054 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 HALP42357 657 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 PKP1Q13835 747 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 AASDHQ4L235 1098 aaPredicted RBP8.18□□□□□ -1.1
USP3-201ENST00000268049 NOL9Q5SY16 702 aaKnown RBP8.18□□□□□ -1.1
USP3-201ENST00000268049 PLPP4Q5VZY2 271 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 TAS2R42Q7RTR8 314 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 E2F7Q96AV8 911 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 PASKQ96RG2 1323 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 SERPINI1Q99574 410 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 JMJD4Q9H9V9 463 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 FANCLQ9NW38 375 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 KCND2Q9NZV8 630 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 NAGPAQ9UK23 515 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 PRDM4Q9UKN5 801 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 ORC6Q9Y5N6 252 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 CLIC4Q9Y696 253 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 KCPQ6ZWJ8 1503 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 KLRG2A4D1S0 409 aaPredicted RBP8.18□□□□□ -1.1
USP3-201ENST00000268049 DDHD2O94830 711 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 MLYCDO95822 493 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 HMBSP08397 361 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 MMEP08473 750 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 DHX9Q08211 1270 aaKnown RBP8.18□□□□□ -1.1
USP3-201ENST00000268049 TFDP2Q14188 446 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 KDELC2Q7Z4H8 507 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 THAP11Q96EK4 314 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 SLC9A7Q96T83 725 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 TEX12Q9BXU0 123 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 DZANK1Q9NVP4 752 aa8.18□□□□□ -1.1
USP3-201ENST00000268049 TBX3O15119 743 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms