RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 CCDC195A0A1B0GUA6 201 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 DNALI1O14645 258 aaPredicted RBP17.7■□□□□ 0.42
SQLE-201ENST00000265896 GRAP2O75791 330 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 GLRA2P23416 452 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 CTCFP49711 727 aaPredicted RBP17.7■□□□□ 0.42
SQLE-201ENST00000265896 CCNHP51946 323 aaPredicted RBP17.7■□□□□ 0.42
SQLE-201ENST00000265896 ACTR2P61160 394 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 IRX4P78413 519 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 JOSD2Q8TAC2 188 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 TCP10LQ8TDR4 215 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 TFAP2BQ92481 460 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 SLC38A10Q9HBR0 1119 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 MARCOQ9UEW3 520 aaPredicted RBP17.7■□□□□ 0.42
SQLE-201ENST00000265896 TRPC5Q9UL62 973 aaPredicted RBP17.7■□□□□ 0.42
SQLE-201ENST00000265896 CST8O60676 142 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 KRT19P08727 400 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 KITP10721 976 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 MUTP22033 750 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 RFC1P35251 1148 aaPredicted RBP17.7■□□□□ 0.42
SQLE-201ENST00000265896 OTUD4Q01804 1114 aaKnown RBP17.7■□□□□ 0.42
SQLE-201ENST00000265896 SPDYE2Q495Y8 402 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 SPOCD1Q6ZMY3 1216 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 MCF2L2Q86YR7 1114 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 DEPTORQ8TB45 409 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 TMC2Q8TDI7 906 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 PYROXD1Q8WU10 500 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 ZNF75CPQ92670 426 aaPredicted RBP17.7■□□□□ 0.42
SQLE-201ENST00000265896 SLCO2A1Q92959 643 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 FAXDC2Q96IV6 333 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 SLC5A4Q9NY91 659 aa17.7■□□□□ 0.42
SQLE-201ENST00000265896 CCND1P24385 295 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 PCK1P35558 622 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 SLC1A1P43005 524 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 DLK2Q6UY11 383 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 NLRP9Q7RTR0 991 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 CEP120Q8N960 986 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 FBXO36Q8NEA4 188 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 MAGEC3Q8TD91 643 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 FBXL18Q96ME1 805 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 CALN1Q9BXU9 219 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 TRIM6Q9C030 488 aaPredicted RBP17.69■□□□□ 0.42
SQLE-201ENST00000265896 DENND2DQ9H6A0 471 aaPredicted RBP17.69■□□□□ 0.42
SQLE-201ENST00000265896 ZNF831Q5JPB2 1677 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 CLUHO75153 1309 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 IL1R2P27930 398 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 MMRN1Q13201 1228 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 SH3PXD2AQ5TCZ1 1133 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 SAMD7Q7Z3H4 446 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 IGDCC3Q8IVU1 814 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 THNSL1Q8IYQ7 743 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 KCTD17Q8N5Z5 321 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 NETO2Q8NC67 525 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 SLC7A6OSQ96CW6 309 aaPredicted RBP17.69■□□□□ 0.42
SQLE-201ENST00000265896 WDR83Q9BRX9 315 aaKnown RBP17.69■□□□□ 0.42
SQLE-201ENST00000265896 JPH1Q9HDC5 661 aaPredicted RBP17.69■□□□□ 0.42
SQLE-201ENST00000265896 ZFP69BQ9UJL9 534 aa17.69■□□□□ 0.42
SQLE-201ENST00000265896 MAP3K13O43283 966 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 EXTL3O43909 919 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 TUBP50607 506 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 HMGCS2P54868 508 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 KRT76Q01546 638 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 EMC2Q15006 297 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 CDO1Q16878 200 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 DSTYKQ6XUX3 929 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 CCDC125Q86Z20 511 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 UNC45BQ8IWX7 931 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 KATNAL2Q8IYT4 538 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 KIAA0319LQ8IZA0 1049 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 MECRQ9BV79 373 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 LY75O60449 1722 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 JAK3P52333 1124 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 PTP4A2Q12974 167 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 RIPK1Q13546 671 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 HIF1AQ16665 826 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 USP37Q86T82 979 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 GBP7Q8N8V2 638 aaPredicted RBP17.68■□□□□ 0.42
SQLE-201ENST00000265896 EXD1Q8NHP7 514 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 MRPL47Q9HD33 250 aaKnown RBP17.68■□□□□ 0.42
SQLE-201ENST00000265896 PARVAQ9NVD7 372 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 EURLQ9NYK6 297 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 PPP1R1BQ9UD71 204 aaPredicted RBP17.68■□□□□ 0.42
SQLE-201ENST00000265896 POLIQ9UNA4 740 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 NR2E3Q9Y5X4 410 aa17.68■□□□□ 0.42
SQLE-201ENST00000265896 MAPK13O15264 365 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 TOP3BO95985 862 aaKnown RBP17.67■□□□□ 0.42
SQLE-201ENST00000265896 HSPA1LP34931 641 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 CNTN2Q02246 1040 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 ZBTB16Q05516 673 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 TRIM50Q86XT4 487 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 LRRC71Q8N4P6 559 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 PAFAH2Q99487 392 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 AVENQ9NQS1 362 aaPredicted RBP17.67■□□□□ 0.42
SQLE-201ENST00000265896 LGALS13Q9UHV8 139 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 RBBP6Q7Z6E9 1792 aaKnown RBP17.67■□□□□ 0.42
SQLE-201ENST00000265896 EDF1O60869 148 aaKnown RBP17.67■□□□□ 0.42
SQLE-201ENST00000265896 PEX11AO75192 247 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 TMEM63AO94886 807 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 TJP3O95049 919 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 ATP4AP20648 1035 aa17.67■□□□□ 0.42
SQLE-201ENST00000265896 PALM2Q8IXS6 379 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms