RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 LRRC19Q9H756 370 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 ACKR2O00590 384 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 MEFVO15553 781 aaPredicted RBP17.17■□□□□ 0.34
CTCF-201ENST00000264010 CCNG2Q16589 344 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 CELF3Q5SZQ8 465 aaKnown RBP17.17■□□□□ 0.34
CTCF-201ENST00000264010 TTC39CQ8N584 583 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 GTF3C2Q8WUA4 911 aaPredicted RBP17.17■□□□□ 0.34
CTCF-201ENST00000264010 FAM118BQ9BPY3 351 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 DCLK3Q9C098 648 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 TBK1Q9UHD2 729 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 ADAMTS5Q9UNA0 930 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 POC1B-GALNT4F8VUJ3 575 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 M0QYV0 167 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 NOMO3P69849 1222 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 ZNF484Q5JVG2 852 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 CENPUQ71F23 418 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 MYCBPAPQ8TBZ2 947 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 FOXP3Q9BZS1 431 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 EXOC1LA0A1B0GW35 172 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 MCF2LO15068 1137 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 PEX5P50542 639 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 GPS1Q13098 491 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 SETDB1Q15047 1291 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 LONP2Q86WA8 852 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 PALM2Q8IXS6 379 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 XPO6Q96QU8 1125 aaKnown RBP17.16■□□□□ 0.34
CTCF-201ENST00000264010 SLC8A3P57103 927 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 SEPT6Q14141 434 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 KCTD19Q17RG1 926 aaPredicted RBP17.16■□□□□ 0.34
CTCF-201ENST00000264010 PHF13Q86YI8 300 aaPredicted RBP17.16■□□□□ 0.34
CTCF-201ENST00000264010 ZNF516Q92618 1163 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 ASNSD1Q9NWL6 643 aa17.16■□□□□ 0.34
CTCF-201ENST00000264010 SOWAHBA6NEL2 793 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 PEX10O60683 326 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 PIGRP01833 764 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 ARSEP51690 589 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 EGFL6Q8IUX8 553 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 GPRC5AQ8NFJ5 357 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 TTC25Q96NG3 672 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 ACO2Q99798 780 aaKnown RBP17.15■□□□□ 0.34
CTCF-201ENST00000264010 AGAP1Q9UPQ3 857 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 OPHN1O60890 802 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 TMED2Q15363 201 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 UAP1Q16222 522 aaPredicted RBP17.15■□□□□ 0.34
CTCF-201ENST00000264010 ARHGEF18Q6ZSZ5 1173 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 PLPPR4Q7Z2D5 763 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 TRAPPC12Q8WVT3 735 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 PRM3Q9NNZ6 103 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 H7C0C1 242 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 CHN1P15882 459 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 PSMC4P43686 418 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 ATP5OP48047 213 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 MKRN3Q13064 507 aaKnown RBP17.15■□□□□ 0.34
CTCF-201ENST00000264010 MAMLD1Q13495 774 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 KYNUQ16719 465 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 ZBTB41Q5SVQ8 909 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 HHATQ5VTY9 493 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 OPTNQ96CV9 577 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 ACAP3Q96P50 834 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 TMEM165Q9HC07 324 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 CHST7Q9NS84 486 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 PCSK1NQ9UHG2 260 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 ARFGEF1Q9Y6D6 1849 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 PRPSAP2O60256 369 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 MCL1Q07820 350 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 TMEM132DQ14C87 1099 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 P3H1Q32P28 736 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 CYP4A22Q5TCH4 519 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 FAM47EQ6ZV65 393 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 CATSPER4Q7RTX7 472 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 KATNAL2Q8IYT4 538 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 TAB3Q8N5C8 712 aaPredicted RBP17.15■□□□□ 0.34
CTCF-201ENST00000264010 RAB3IL1Q8TBN0 382 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 NSMCE1Q8WV22 266 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 MIEF2Q96C03 454 aa17.15■□□□□ 0.34
CTCF-201ENST00000264010 ASS1P00966 412 aaKnown RBP17.14■□□□□ 0.33
CTCF-201ENST00000264010 TNFSF9P41273 254 aa17.14■□□□□ 0.33
CTCF-201ENST00000264010 RBP5P82980 135 aa17.14■□□□□ 0.33
CTCF-201ENST00000264010 STAT4Q14765 748 aa17.14■□□□□ 0.33
CTCF-201ENST00000264010 LONRF1Q17RB8 773 aa17.14■□□□□ 0.33
CTCF-201ENST00000264010 HSPH1Q92598 858 aa17.14■□□□□ 0.33
CTCF-201ENST00000264010 FAM49AQ9H0Q0 323 aaPredicted RBP17.14■□□□□ 0.33
CTCF-201ENST00000264010 RHBDL2Q9NX52 303 aa17.14■□□□□ 0.33
CTCF-201ENST00000264010 UNGP13051 313 aaPredicted RBP17.14■□□□□ 0.33
CTCF-201ENST00000264010 PPP1R21Q6ZMI0 780 aa17.14■□□□□ 0.33
CTCF-201ENST00000264010 PCGF5Q86SE9 256 aa17.14■□□□□ 0.33
CTCF-201ENST00000264010 IQCGQ9H095 443 aaKnown RBP17.14■□□□□ 0.33
CTCF-201ENST00000264010 CDC42EP4Q9H3Q1 356 aaKnown RBP17.14■□□□□ 0.33
CTCF-201ENST00000264010 NOP53Q9NZM5 478 aaKnown RBP17.14■□□□□ 0.33
CTCF-201ENST00000264010 RIPK2O43353 540 aa17.14■□□□□ 0.33
CTCF-201ENST00000264010 NUDT17P0C025 328 aa17.14■□□□□ 0.33
CTCF-201ENST00000264010 FAM102AQ5T9C2 384 aaPredicted RBP17.14■□□□□ 0.33
CTCF-201ENST00000264010 C3orf20Q8ND61 904 aa17.14■□□□□ 0.33
CTCF-201ENST00000264010 MDM1Q8TC05 714 aa17.14■□□□□ 0.33
CTCF-201ENST00000264010 PGM2Q96G03 612 aa17.14■□□□□ 0.33
CTCF-201ENST00000264010 RBM15Q96T37 977 aaKnown RBP eCLIP17.14■□□□□ 0.33
CTCF-201ENST00000264010 OSBPL1AQ9BXW6 950 aa17.14■□□□□ 0.33
CTCF-201ENST00000264010 ACTR5Q9H9F9 607 aaPredicted RBP17.14■□□□□ 0.33
CTCF-201ENST00000264010 ZNF711Q9Y462 761 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms