RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 FIS1Q9Y3D6 152 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 IQCA1LA6NCM1 817 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 C2orf71A6NGG8 1288 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 TCF4P15884 667 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 NCF2P19878 526 aaPredicted RBP17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 SERPINB6P35237 376 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 IFRD2Q12894 506 aaPredicted RBP17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 NETO2Q8NC67 525 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 PPP1R13LQ8WUF5 828 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 MYH11P35749 1972 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 ADSSP30520 456 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 ATXN3P54252 364 aaPredicted RBP17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 Q3C1V9 767 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 ZNF354CQ86Y25 554 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 GLIS1Q8NBF1 620 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 ABT1Q9ULW3 272 aaKnown RBP17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 RIPK3Q9Y572 518 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 TOGARAM1Q9Y4F4 1720 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 ITGB4P16144 1822 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 KCNN4O15554 427 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 OPHN1O60890 802 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 CALB1P05937 261 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 STXBP2Q15833 593 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 ENOSF1Q7L5Y1 443 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 TRAPPC12Q8WVT3 735 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 TSSK1BQ9BXA7 367 aa17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 PSMC3IPQ9P2W1 217 aaPredicted RBP17.01■□□□□ 0.31
PDZRN3-201ENST00000263666 USP54Q70EL1 1684 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 ADAMTS7Q9UKP4 1686 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 SLC26A4O43511 780 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 EXTL3O43909 919 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 LGSNQ5TDP6 509 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 SLFN12LQ6IEE8 588 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 C2orf69Q8N8R5 385 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 PXMP2Q9NR77 195 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 FAM49BQ9NUQ9 324 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 WDR46O15213 610 aaKnown RBP17■□□□□ 0.31
PDZRN3-201ENST00000263666 ENTPD5O75356 428 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 PTK7Q13308 1070 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 DUOXA2Q1HG44 320 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 PREPLQ4J6C6 727 aaPredicted RBP17■□□□□ 0.31
PDZRN3-201ENST00000263666 RASIP1Q5U651 963 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 RCOR2Q8IZ40 523 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 DMAC2Q9NW81 257 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 DOT1LQ8TEK3 1739 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 DSG3P32926 999 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 PEX5P50542 639 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 XKR3Q5GH77 459 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 NXNQ6DKJ4 435 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 EIF1ADQ8N9N8 165 aaKnown RBP17■□□□□ 0.31
PDZRN3-201ENST00000263666 ATXN2LQ8WWM7 1075 aaKnown RBP17■□□□□ 0.31
PDZRN3-201ENST00000263666 PCMTD2Q9NV79 361 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 NOCTQ9UK39 431 aaKnown RBP17■□□□□ 0.31
PDZRN3-201ENST00000263666 INPP5FQ9Y2H2 1132 aa17■□□□□ 0.31
PDZRN3-201ENST00000263666 RASSF9O75901 435 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 CNTN2Q02246 1040 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 MROH9Q5TGP6 573 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 TDRD10Q5VZ19 366 aaKnown RBP16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 HELQQ8TDG4 1101 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 LPAR1Q92633 364 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 ZBTB10Q96DT7 871 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 FAM49AQ9H0Q0 323 aaPredicted RBP16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 RPF1Q9H9Y2 349 aaKnown RBP16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 NUB1Q9Y5A7 615 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 GJB1P08034 283 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 SESN2P58004 480 aaPredicted RBP16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 LRRC6Q86X45 466 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 C4orf19Q8IY42 314 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 ARMC2Q8NEN0 867 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 MAGEB18Q96M61 343 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 ACAP3Q96P50 834 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 GPR88Q9GZN0 384 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 RANBP17Q9H2T7 1088 aaKnown RBP16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 TELO2Q9Y4R8 837 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 TNFSF9P41273 254 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 GPC3P51654 580 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 STAT5BP51692 787 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 AMHR2Q16671 573 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 SPDYE2Q495Y8 402 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 FOXR2Q6PJQ5 311 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 SPOCD1Q6ZMY3 1216 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 ABRAQ8N0Z2 381 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 C3orf20Q8ND61 904 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 CCHCR1Q8TD31 782 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 CKAP2Q8WWK9 683 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 TTC25Q96NG3 672 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 PAFAH2Q99487 392 aa16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 MRPL42Q9Y6G3 142 aaKnown RBP16.99■□□□□ 0.31
PDZRN3-201ENST00000263666 IQANK1A0A1B0GTG1 560 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 YDJCA8MPS7 323 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 H3BRJ5 948 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 CYP1A2P05177 515 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 BGNP21810 368 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 GTF2BQ00403 316 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 ARID3BQ8IVW6 561 aaPredicted RBP16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 SLC25A41Q8N5S1 370 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 TCP10LQ8TDR4 215 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 KIAA1683Q9H0B3 1180 aa16.98■□□□□ 0.31
PDZRN3-201ENST00000263666 RXFP1Q9HBX9 757 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms