RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 C12orf4Q9NQ89 552 aa8.78□□□□□ -1
LDB3-201ENST00000263066 TBC1D12O60347 775 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 EXOC3O60645 756 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 KLHL41O60662 606 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 GAS7O60861 476 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 B3GALNT1O75752 331 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 ZBED1O96006 694 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 ITGA4P13612 1032 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 OSBPP22059 807 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 IL4RP24394 825 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 VARSP26640 1264 aaKnown RBP8.77□□□□□ -1.01
LDB3-201ENST00000263066 TNFRSF8P28908 595 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 PPARGP37231 505 aaPredicted RBP8.77□□□□□ -1.01
LDB3-201ENST00000263066 CHN2P52757 468 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 ITGA9Q13797 1035 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 VGLL4Q14135 290 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 CTC1Q2NKJ3 1217 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 C4orf50Q6ZRC1 276 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 INPP5DQ92835 1189 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 RNF25Q96BH1 459 aaPredicted RBP8.77□□□□□ -1.01
LDB3-201ENST00000263066 ZFYVE19Q96K21 471 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 RMDN3Q96TC7 470 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 DNAJC7Q99615 494 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 HAUS8Q9BT25 410 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 TRIM55Q9BYV6 548 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 LIN28AQ9H9Z2 209 aaKnown RBP8.77□□□□□ -1.01
LDB3-201ENST00000263066 METTL14Q9HCE5 456 aaKnown RBP8.77□□□□□ -1.01
LDB3-201ENST00000263066 AK5Q9Y6K8 562 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 SBF2Q86WG5 1849 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 TCRBV5S4A2TA0A5A2 114 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 ZSCAN5BA6NJL1 495 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 ZBBXA8MT70 800 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 BIRC5O15392 142 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 CAP2P40123 477 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 PMS1P54277 932 aaKnown RBP8.77□□□□□ -1.01
LDB3-201ENST00000263066 OTUD4Q01804 1114 aaKnown RBP8.77□□□□□ -1.01
LDB3-201ENST00000263066 TRIP13Q15645 432 aaPredicted RBP8.77□□□□□ -1.01
LDB3-201ENST00000263066 CALCRLQ16602 461 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 KLHDC7AQ5VTJ3 777 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 PACS1Q6VY07 963 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 FASTKD5Q7L8L6 764 aaKnown RBP8.77□□□□□ -1.01
LDB3-201ENST00000263066 GSTA5Q7RTV2 222 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 NLRX1Q86UT6 975 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 NELFCDQ8IXH7 590 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 ADSSL1Q8N142 457 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 FBXO25Q8TCJ0 367 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 ZNF507Q8TCN5 953 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 EHD1Q9H4M9 534 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 RABGEF1Q9UJ41 708 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.77□□□□□ -1.01
LDB3-201ENST00000263066 DOT1LQ8TEK3 1739 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 ABCB11O95342 1321 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 PITPNM2Q9BZ72 1349 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 TMCC2O75069 709 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 MCF2P10911 925 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 KLRC1P26715 233 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 MZF1P28698 734 aaPredicted RBP8.77□□□□□ -1.01
LDB3-201ENST00000263066 CHKAP35790 457 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 CASP5P51878 434 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 BAATQ14032 418 aaPredicted RBP8.77□□□□□ -1.01
LDB3-201ENST00000263066 ACSBG2Q5FVE4 666 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 GPATCH4Q5T3I0 446 aaKnown RBP8.77□□□□□ -1.01
LDB3-201ENST00000263066 CDKAL1Q5VV42 579 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 KLHDC10Q6PID8 442 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 RNF207Q6ZRF8 634 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 LRRC6Q86X45 466 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 CATSPER3Q86XQ3 398 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 TTC30BQ8N4P2 665 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 ATXN2LQ8WWM7 1075 aaKnown RBP8.77□□□□□ -1.01
LDB3-201ENST00000263066 PYDC1Q8WXC3 89 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 NSL1Q96IY1 281 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 EBF3Q9H4W6 596 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 PLEKHA5Q9HAU0 1116 aa8.77□□□□□ -1.01
LDB3-201ENST00000263066 C1orf232A0A0U1RR37 186 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 LINC00854A0A1B0GVQ3 168 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 DDX3XO00571 662 aaKnown RBP eCLIP8.76□□□□□ -1.01
LDB3-201ENST00000263066 FYNP06241 537 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 IDO1P14902 403 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 RPS12P25398 132 aaKnown RBP8.76□□□□□ -1.01
LDB3-201ENST00000263066 NUP107P57740 925 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 SULT2A1Q06520 285 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 HP1BP3Q5SSJ5 553 aaPredicted RBP8.76□□□□□ -1.01
LDB3-201ENST00000263066 PERM1Q5SV97 790 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 SEL1L2Q5TEA6 688 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 WDR59Q6PJI9 974 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 LDHDQ86WU2 507 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 OR6Y1Q8NGX8 325 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 NKX2-3Q8TAU0 364 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 CFAP57Q96MR6 1250 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 PYM1Q9BRP8 204 aaKnown RBP8.76□□□□□ -1.01
LDB3-201ENST00000263066 LSM14BQ9BX40 385 aaKnown RBP8.76□□□□□ -1.01
LDB3-201ENST00000263066 INIPQ9NRY2 104 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 HEY2Q9UBP5 337 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 HERC5Q9UII4 1024 aaKnown RBP8.76□□□□□ -1.01
LDB3-201ENST00000263066 PP2D1A8MPX8 630 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 GTPBP6O43824 516 aaPredicted RBP8.76□□□□□ -1.01
LDB3-201ENST00000263066 KRT8P05787 483 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 NR4A1P22736 598 aa8.76□□□□□ -1.01
LDB3-201ENST00000263066 TCEA1P23193 301 aaKnown RBP8.76□□□□□ -1.01
LDB3-201ENST00000263066 PMLP29590 882 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms