RNA–Protein interactions for RNA: ENST00000262805.16

PDE4C-201, Transcript of phosphodiesterase 4C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4C, Length 2,472 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-201ENST00000262805 DYNLT1P63172 113 aa17.64■□□□□ 0.42
PDE4C-201ENST00000262805 ZNF268Q14587 947 aaPredicted RBP17.64■□□□□ 0.42
PDE4C-201ENST00000262805 SMTNL2Q2TAL5 461 aa17.64■□□□□ 0.42
PDE4C-201ENST00000262805 FAM182AQ5T1J6 154 aa17.64■□□□□ 0.42
PDE4C-201ENST00000262805 RNASEH2BQ5TBB1 312 aaKnown RBP17.64■□□□□ 0.42
PDE4C-201ENST00000262805 DCUN1D2Q6PH85 259 aa17.64■□□□□ 0.42
PDE4C-201ENST00000262805 ANKMY2Q8IV38 441 aa17.64■□□□□ 0.42
PDE4C-201ENST00000262805 TAB3Q8N5C8 712 aaPredicted RBP17.64■□□□□ 0.42
PDE4C-201ENST00000262805 KLHL29Q96CT2 875 aa17.64■□□□□ 0.42
PDE4C-201ENST00000262805 CFAP57Q96MR6 1250 aa17.64■□□□□ 0.42
PDE4C-201ENST00000262805 VPS37BQ9H9H4 285 aa17.64■□□□□ 0.42
PDE4C-201ENST00000262805 CISHQ9NSE2 258 aa17.64■□□□□ 0.42
PDE4C-201ENST00000262805 GINM1Q9NU53 330 aa17.64■□□□□ 0.42
PDE4C-201ENST00000262805 ACTL7BQ9Y614 415 aa17.64■□□□□ 0.42
PDE4C-201ENST00000262805 MGAMO43451 1857 aa17.64■□□□□ 0.41
PDE4C-201ENST00000262805 A0A1W2PPM1 405 aa17.64■□□□□ 0.41
PDE4C-201ENST00000262805 OAZ1P54368 228 aa17.64■□□□□ 0.41
PDE4C-201ENST00000262805 GDF10P55107 478 aa17.64■□□□□ 0.41
PDE4C-201ENST00000262805 PPP1R15BQ5SWA1 713 aa17.64■□□□□ 0.41
PDE4C-201ENST00000262805 PPP1R21Q6ZMI0 780 aa17.64■□□□□ 0.41
PDE4C-201ENST00000262805 ANKRD35Q8N283 1001 aa17.64■□□□□ 0.41
PDE4C-201ENST00000262805 DENND1AQ8TEH3 1009 aa17.64■□□□□ 0.41
PDE4C-201ENST00000262805 AGAP11Q8TF27 550 aa17.64■□□□□ 0.41
PDE4C-201ENST00000262805 JDP2Q8WYK2 163 aa17.64■□□□□ 0.41
PDE4C-201ENST00000262805 MYCBPQ99417 103 aaPredicted RBP17.64■□□□□ 0.41
PDE4C-201ENST00000262805 PITPNM3Q9BZ71 974 aa17.64■□□□□ 0.41
PDE4C-201ENST00000262805 TRABDQ9H4I3 376 aa17.64■□□□□ 0.41
PDE4C-201ENST00000262805 STK38LQ9Y2H1 464 aa17.64■□□□□ 0.41
PDE4C-201ENST00000262805 RPA3P35244 121 aaPredicted RBP17.63■□□□□ 0.41
PDE4C-201ENST00000262805 VCPP55072 806 aaKnown RBP17.63■□□□□ 0.41
PDE4C-201ENST00000262805 NEDD9Q14511 834 aa17.63■□□□□ 0.41
PDE4C-201ENST00000262805 EFTUD2Q15029 972 aaKnown RBP eCLIP17.63■□□□□ 0.41
PDE4C-201ENST00000262805 DRICH1Q6PGQ1 229 aaPredicted RBP17.63■□□□□ 0.41
PDE4C-201ENST00000262805 BRSK2Q8IWQ3 736 aa17.63■□□□□ 0.41
PDE4C-201ENST00000262805 VPS33BQ9H267 617 aa17.63■□□□□ 0.41
PDE4C-201ENST00000262805 PICK1Q9NRD5 415 aa17.63■□□□□ 0.41
PDE4C-201ENST00000262805 SPDYE16A6NNV3 312 aaPredicted RBP17.63■□□□□ 0.41
PDE4C-201ENST00000262805 SGK1O00141 431 aa17.63■□□□□ 0.41
PDE4C-201ENST00000262805 FGFR1P11362 822 aa17.63■□□□□ 0.41
PDE4C-201ENST00000262805 SLC8A1P32418 973 aa17.63■□□□□ 0.41
PDE4C-201ENST00000262805 GMPSP49915 693 aaPredicted RBP17.63■□□□□ 0.41
PDE4C-201ENST00000262805 IL9RQ01113 521 aa17.63■□□□□ 0.41
PDE4C-201ENST00000262805 PLCB3Q01970 1234 aa17.63■□□□□ 0.41
PDE4C-201ENST00000262805 LMNB2Q03252 620 aa17.63■□□□□ 0.41
PDE4C-201ENST00000262805 MKRN3Q13064 507 aaKnown RBP17.63■□□□□ 0.41
PDE4C-201ENST00000262805 PDIA2Q13087 525 aaKnown RBP17.63■□□□□ 0.41
PDE4C-201ENST00000262805 TFDP3Q5H9I0 405 aa17.63■□□□□ 0.41
PDE4C-201ENST00000262805 KCNT1Q5JUK3 1230 aa17.63■□□□□ 0.41
PDE4C-201ENST00000262805 ANKRD22Q5VYY1 191 aa17.63■□□□□ 0.41
PDE4C-201ENST00000262805 ASRGL1Q7L266 308 aa17.63■□□□□ 0.41
PDE4C-201ENST00000262805 ARFGAP1Q8N6T3 406 aa17.63■□□□□ 0.41
PDE4C-201ENST00000262805 ZNF668Q96K58 619 aaPredicted RBP17.63■□□□□ 0.41
PDE4C-201ENST00000262805 KLHL14Q9P2G3 628 aa17.63■□□□□ 0.41
PDE4C-201ENST00000262805 LOC102724159A0A0B4J2E5 919 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 C3orf70A6NLC5 250 aaPredicted RBP17.62■□□□□ 0.41
PDE4C-201ENST00000262805 ADCY3O60266 1144 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 KRT15P19012 456 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 UBA1P22314 1058 aaKnown RBP17.62■□□□□ 0.41
PDE4C-201ENST00000262805 ABCD1P33897 745 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 CETN2P41208 172 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 HIRAP54198 1017 aaPredicted RBP17.62■□□□□ 0.41
PDE4C-201ENST00000262805 GPX6P59796 221 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 RIPK1Q13546 671 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 PWP2Q15269 919 aaKnown RBP17.62■□□□□ 0.41
PDE4C-201ENST00000262805 SLC1A5Q15758 541 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 MSS51Q4VC12 460 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 CATSPERGQ6ZRH7 1159 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 PRPF31Q8WWY3 499 aaKnown RBP17.62■□□□□ 0.41
PDE4C-201ENST00000262805 TCHPQ9BT92 498 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 IMPG2Q9BZV3 1241 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 ZWILCHQ9H900 591 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 ARHGEF3Q9NR81 526 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 CYTH4Q9UIA0 394 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 CALB1P05937 261 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 EZRP15311 586 aaKnown RBP17.62■□□□□ 0.41
PDE4C-201ENST00000262805 IL1R2P27930 398 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 RFC1P35251 1148 aaPredicted RBP17.62■□□□□ 0.41
PDE4C-201ENST00000262805 TARBP2Q15633 366 aaKnown RBP17.62■□□□□ 0.41
PDE4C-201ENST00000262805 STXBP2Q15833 593 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 RNF43Q68DV7 783 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 KIAA0319LQ8IZA0 1049 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 RIBC1Q8N443 379 aaPredicted RBP17.62■□□□□ 0.41
PDE4C-201ENST00000262805 JOSD2Q8TAC2 188 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 KCNN1Q92952 543 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 WDR83Q9BRX9 315 aaKnown RBP17.62■□□□□ 0.41
PDE4C-201ENST00000262805 NIFKQ9BYG3 293 aaKnown RBP17.62■□□□□ 0.41
PDE4C-201ENST00000262805 FOXP3Q9BZS1 431 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 GEMIN8Q9NWZ8 242 aaKnown RBP17.62■□□□□ 0.41
PDE4C-201ENST00000262805 AFG3L2Q9Y4W6 797 aa17.62■□□□□ 0.41
PDE4C-201ENST00000262805 IGKV6D-21A0A0A0MT36 114 aa17.61■□□□□ 0.41
PDE4C-201ENST00000262805 MSCO60682 206 aa17.61■□□□□ 0.41
PDE4C-201ENST00000262805 IRX3P78415 501 aaPredicted RBP17.61■□□□□ 0.41
PDE4C-201ENST00000262805 MCL1Q07820 350 aa17.61■□□□□ 0.41
PDE4C-201ENST00000262805 ORC1Q13415 861 aa17.61■□□□□ 0.41
PDE4C-201ENST00000262805 MORF4L2Q15014 288 aa17.61■□□□□ 0.41
PDE4C-201ENST00000262805 LRRC38Q5VT99 294 aa17.61■□□□□ 0.41
PDE4C-201ENST00000262805 DENND1BQ6P3S1 775 aa17.61■□□□□ 0.41
PDE4C-201ENST00000262805 CDR2LQ86X02 465 aaPredicted RBP17.61■□□□□ 0.41
PDE4C-201ENST00000262805 GBP7Q8N8V2 638 aaPredicted RBP17.61■□□□□ 0.41
PDE4C-201ENST00000262805 MAK16Q9BXY0 300 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms