RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 MEI1Q5TIA1 1274 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 DENND1BQ6P3S1 775 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 ADGRF2Q8IZF7 708 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 C1orf131Q8NDD1 294 aaKnown RBP13.82□□□□□ -0.2
VAMP7-201ENST00000262640 NUP85Q9BW27 656 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 PPP1R12CQ9BZL4 782 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 WNT8AQ9H1J5 351 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 TBX21Q9UL17 535 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 SNX12Q9UMY4 172 aa13.82□□□□□ -0.2
VAMP7-201ENST00000262640 A8MXQ7 604 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 ATMINO43313 823 aaPredicted RBP13.81□□□□□ -0.2
VAMP7-201ENST00000262640 BUB1BO60566 1050 aaPredicted RBP13.81□□□□□ -0.2
VAMP7-201ENST00000262640 SLU7O95391 586 aaKnown RBP13.81□□□□□ -0.2
VAMP7-201ENST00000262640 FTCDO95954 541 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 CALB1P05937 261 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 PRLRP16471 622 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 MMP8P22894 467 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 GNL1P36915 607 aaPredicted RBP13.81□□□□□ -0.2
VAMP7-201ENST00000262640 WHAMMP3Q1A5X7 153 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 NOMO2Q5JPE7 1267 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 CLLU1OSQ5K130 101 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 DAAM2Q86T65 1068 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 PDCL2Q8N4E4 241 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 ZNF564Q8TBZ8 553 aaPredicted RBP13.81□□□□□ -0.2
VAMP7-201ENST00000262640 SCLYQ96I15 445 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 C11orf70Q9BRQ4 267 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 TLR10Q9BXR5 811 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 KANSL3Q9P2N6 904 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 HYOU1Q9Y4L1 999 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 MICAL2O94851 1124 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 AARSP49588 968 aaKnown RBP eCLIP13.81□□□□□ -0.2
VAMP7-201ENST00000262640 CCL23P55773 120 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 PTP4A2Q12974 167 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 C11orf63Q6NUN7 778 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 LCLAT1Q6UWP7 414 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 MMS22LQ6ZRQ5 1243 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 CRYBG2Q8N1P7 616 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 WDTC1Q8N5D0 677 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 PAWRQ96IZ0 340 aaKnown RBP13.81□□□□□ -0.2
VAMP7-201ENST00000262640 SENP8Q96LD8 212 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 TMEM106CQ9BVX2 250 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
VAMP7-201ENST00000262640 TANC1Q9C0D5 1861 aa13.81□□□□□ -0.2
VAMP7-201ENST00000262640 FGFR1P11362 822 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 TCP1P17987 556 aaKnown RBP13.8□□□□□ -0.2
VAMP7-201ENST00000262640 RRM1P23921 792 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 CYP2C18P33260 490 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 PEX26Q7Z412 305 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 ACOT1Q86TX2 421 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 TMEM86AQ8N2M4 240 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 MSANTD4Q8NCY6 345 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 UBE2Q2Q8WVN8 375 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 TMEM39AQ9NV64 488 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 CACNG4Q9UBN1 327 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 STXBP5LQ9Y2K9 1186 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 NME7Q9Y5B8 376 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 PCDHB7Q9Y5E2 793 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 SCINQ9Y6U3 715 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 M0QYV0 167 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 NCK2O43639 380 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 CLTBP09497 229 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 ARHGAP17Q68EM7 881 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 DSTYKQ6XUX3 929 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 ERICH1Q86X53 443 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 C3orf58Q8NDZ4 430 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 TNIP3Q96KP6 325 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 MRPL47Q9HD33 250 aaKnown RBP13.8□□□□□ -0.2
VAMP7-201ENST00000262640 ABCB6Q9NP58 842 aa13.8□□□□□ -0.2
VAMP7-201ENST00000262640 RFC2P35250 354 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 GTF2F1P35269 517 aaKnown RBP eCLIP13.79□□□□□ -0.2
VAMP7-201ENST00000262640 RPS6KA1Q15418 735 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 WSCD1Q658N2 575 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 PLEKHA7Q6IQ23 1121 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 DCLRE1AQ6PJP8 1040 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 NECAB2Q7Z6G3 386 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 MNS1Q8NEH6 495 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 SPATA18Q8TC71 538 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 PAAF1Q9BRP4 392 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 CARD6Q9BX69 1037 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 CHORDC1Q9UHD1 332 aaPredicted RBP13.79□□□□□ -0.2
VAMP7-201ENST00000262640 TSPAN16Q9UKR8 245 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 AMFRQ9UKV5 643 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 LRFN2Q9ULH4 789 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 STRIP2Q9ULQ0 834 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 GABRDO14764 452 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 HOXA2O43364 376 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 B3GAT3O94766 335 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 PDGFRBP09619 1106 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 LHX1P48742 406 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 DSC1Q08554 894 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 LRRC26Q2I0M4 334 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 TCTN1Q2MV58 587 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 GOLGA7BQ2TAP0 167 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 NT5DC3Q86UY8 548 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 OSTM1Q86WC4 334 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 ABI1Q8IZP0 508 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 CEP112Q8N8E3 955 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 C12orf29Q8N999 325 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 OSBPL9Q96SU4 736 aa13.79□□□□□ -0.2
VAMP7-201ENST00000262640 GOLPH3Q9H4A6 298 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms