RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 SLCO2A1Q92959 643 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 UROC1Q96N76 676 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 TTC1Q99614 292 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 CNPY3Q9BT09 278 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 ABCB6Q9NP58 842 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 BARX2Q9UMQ3 279 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-201ENST00000262539 INPP5FQ9Y2H2 1132 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 PCDHA3Q9Y5H8 950 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 FSCN2O14926 492 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 HGSO14964 777 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-201ENST00000262539 COG7P83436 770 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 GRIK4Q16099 956 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 PLEKHA7Q6IQ23 1121 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 URGCPQ8TCY9 931 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 ATP6V1E2Q96A05 226 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 CDT1Q9H211 546 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 EPB41L5Q9HCM4 733 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 SMYD2Q9NRG4 433 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 RCOR3Q9P2K3 495 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-201ENST00000262539 KANSL3Q9P2N6 904 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 QSER1Q2KHR3 1735 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 KIAA1551Q9HCM1 1747 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 SRGAP2BP0DMP2 458 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 ACTN1P12814 892 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 HPDP32754 393 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-201ENST00000262539 HSPA9P38646 679 aaKnown RBP8.66□□□□□ -1.02
PTPN3-201ENST00000262539 STAT4Q14765 748 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 KAZNQ674X7 775 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 CREG2Q8IUH2 290 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 C12orf50Q8NA57 414 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-201ENST00000262539 SLC30A5Q8TAD4 765 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 HELQQ8TDG4 1101 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 DRG1Q9Y295 367 aaKnown RBP8.66□□□□□ -1.02
PTPN3-201ENST00000262539 OAS2P29728 719 aaKnown RBP8.66□□□□□ -1.02
PTPN3-201ENST00000262539 DCP1BQ8IZD4 617 aaKnown RBP8.66□□□□□ -1.02
PTPN3-201ENST00000262539 GPRC5CQ9NQ84 441 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 RSPH14Q9UHP6 348 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 LRRIQ3A6PVS8 624 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-201ENST00000262539 ZNF487B1APH4 448 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 HOXD8P13378 290 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-201ENST00000262539 HTR7P34969 479 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 CRYBB1P53674 252 aaPredicted RBP8.66□□□□□ -1.02
PTPN3-201ENST00000262539 PPARDQ03181 441 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 SMARCB1Q12824 385 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 RNF139Q8WU17 664 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 ZNF606Q8WXB4 792 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 TRAIPQ9BWF2 469 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 TRPV6Q9H1D0 765 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 FAM96AQ9H5X1 160 aa8.66□□□□□ -1.02
PTPN3-201ENST00000262539 LRRD1A4D1F6 860 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 NEMP1O14524 444 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 NVLO15381 856 aaKnown RBP8.65□□□□□ -1.02
PTPN3-201ENST00000262539 KRT1P04264 644 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 RPL9P32969 192 aaKnown RBP8.65□□□□□ -1.02
PTPN3-201ENST00000262539 LRRC49Q8IUZ0 686 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 SIX6OS1Q8N1H7 587 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 LRRC57Q8N9N7 239 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 SHOC2Q9UQ13 582 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 ZNF148Q9UQR1 794 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 TAF1LQ8IZX4 1826 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 MAP2K7O14733 419 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 KRT15P19012 456 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 LHX1P48742 406 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 RAB44Q7Z6P3 723 aaPredicted RBP8.65□□□□□ -1.02
PTPN3-201ENST00000262539 THEM5Q8N1Q8 247 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 CDC26Q8NHZ8 85 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.65□□□□□ -1.02
PTPN3-201ENST00000262539 IRX2Q9BZI1 471 aaPredicted RBP8.65□□□□□ -1.02
PTPN3-201ENST00000262539 NXF1Q9UBU9 619 aaKnown RBP8.65□□□□□ -1.02
PTPN3-201ENST00000262539 STK39Q9UEW8 545 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 BAG5Q9UL15 447 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 AGAP1Q9UPQ3 857 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 RAD54BQ9Y620 910 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 IGF2BP3O00425 579 aaKnown RBP eCLIP8.65□□□□□ -1.02
PTPN3-201ENST00000262539 F2P00734 622 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 PSEN2P49810 448 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 BCAT1P54687 386 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 PSMC1P62191 440 aaKnown RBP8.65□□□□□ -1.02
PTPN3-201ENST00000262539 ZNF792Q3KQV3 632 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 OSBPL8Q9BZF1 889 aa8.65□□□□□ -1.02
PTPN3-201ENST00000262539 NCAM2O15394 837 aa8.65□□□□□ -1.03
PTPN3-201ENST00000262539 CA12O43570 354 aa8.65□□□□□ -1.03
PTPN3-201ENST00000262539 RGS20O76081 388 aa8.65□□□□□ -1.03
PTPN3-201ENST00000262539 ADRB2P07550 413 aa8.65□□□□□ -1.03
PTPN3-201ENST00000262539 DARSP14868 501 aaKnown RBP8.65□□□□□ -1.03
PTPN3-201ENST00000262539 CBWD6Q4V339 395 aa8.65□□□□□ -1.03
PTPN3-201ENST00000262539 CBWD3Q5JTY5 395 aa8.65□□□□□ -1.03
PTPN3-201ENST00000262539 CBWD5Q5RIA9 395 aa8.65□□□□□ -1.03
PTPN3-201ENST00000262539 NAA35Q5VZE5 725 aa8.65□□□□□ -1.03
PTPN3-201ENST00000262539 C15orf39Q6ZRI6 1047 aa8.65□□□□□ -1.03
PTPN3-201ENST00000262539 RAPH1Q70E73 1250 aa8.65□□□□□ -1.03
PTPN3-201ENST00000262539 RFX6Q8HWS3 928 aa8.65□□□□□ -1.03
PTPN3-201ENST00000262539 MCUQ8NE86 351 aa8.65□□□□□ -1.03
PTPN3-201ENST00000262539 TMEM109Q9BVC6 243 aa8.65□□□□□ -1.03
PTPN3-201ENST00000262539 FUT8Q9BYC5 575 aa8.65□□□□□ -1.03
PTPN3-201ENST00000262539 RGS16O15492 202 aaPredicted RBP8.65□□□□□ -1.03
PTPN3-201ENST00000262539 EGFRP00533 1210 aa8.65□□□□□ -1.03
PTPN3-201ENST00000262539 AGTP01019 485 aa8.65□□□□□ -1.03
PTPN3-201ENST00000262539 CYP1A1P04798 512 aaPredicted RBP8.65□□□□□ -1.03
PTPN3-201ENST00000262539 STAG3L1P0CL83 205 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms