RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 TAF1DQ9H5J8 278 aaPredicted RBP12.72□□□□□ -0.37
SPG11-201ENST00000261866 TRIM33Q9UPN9 1127 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 RNF103-CHMP3A0A140T963 221 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 C6orf10Q5SRN2 563 aa12.72□□□□□ -0.37
SPG11-201ENST00000261866 ASS1P00966 412 aaKnown RBP12.71□□□□□ -0.37
SPG11-201ENST00000261866 RFX5P48382 616 aaPredicted RBP12.71□□□□□ -0.37
SPG11-201ENST00000261866 PXMP2Q9NR77 195 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 C6orf203Q9P0P8 240 aaPredicted RBP12.71□□□□□ -0.37
SPG11-201ENST00000261866 TRAF3IP3Q9Y228 551 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 RFX7Q2KHR2 1363 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 CCDC151A5D8V7 595 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 MAP3K13O43283 966 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 FDPSP14324 419 aaKnown RBP12.71□□□□□ -0.37
SPG11-201ENST00000261866 ZBTB17Q13105 803 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 ANGPT1Q15389 498 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 EMBQ6PCB8 327 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 DDI1Q8WTU0 396 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 TMEM8AQ9HCN3 771 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 MYO1GB0I1T2 1018 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 DCTN3O75935 186 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 STAG3L1P0CL83 205 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 ACAT1P24752 427 aaKnown RBP12.71□□□□□ -0.37
SPG11-201ENST00000261866 CIPCQ9C0C6 399 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 CATSPERBQ9H7T0 1116 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 ECT2Q9H8V3 914 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 AAASQ9NRG9 546 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 CST8O60676 142 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 HAUS5O94927 633 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 GUCY2CP25092 1073 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 MEI1Q5TIA1 1274 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 SARM1Q6SZW1 724 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 IFNEQ86WN2 208 aa12.71□□□□□ -0.37
SPG11-201ENST00000261866 A8MX80 341 aa12.71□□□□□ -0.38
SPG11-201ENST00000261866 SRGNP10124 158 aa12.71□□□□□ -0.38
SPG11-201ENST00000261866 MAPK9P45984 424 aa12.71□□□□□ -0.38
SPG11-201ENST00000261866 FXR1P51114 621 aaKnown RBP eCLIP12.71□□□□□ -0.38
SPG11-201ENST00000261866 AARS2Q5JTZ9 985 aaKnown RBP12.71□□□□□ -0.38
SPG11-201ENST00000261866 LVRNQ6Q4G3 990 aa12.71□□□□□ -0.38
SPG11-201ENST00000261866 ADGRF2Q8IZF7 708 aa12.71□□□□□ -0.38
SPG11-201ENST00000261866 EHD2Q9NZN4 543 aa12.71□□□□□ -0.38
SPG11-201ENST00000261866 MADDQ8WXG6 1647 aa12.71□□□□□ -0.38
SPG11-201ENST00000261866 PLEKP08567 350 aaPredicted RBP12.71□□□□□ -0.38
SPG11-201ENST00000261866 GHRP10912 638 aa12.71□□□□□ -0.38
SPG11-201ENST00000261866 GUCY1A3Q02108 690 aa12.71□□□□□ -0.38
SPG11-201ENST00000261866 SENP6Q9GZR1 1112 aaPredicted RBP12.71□□□□□ -0.38
SPG11-201ENST00000261866 NMRK2Q9NPI5 230 aa12.71□□□□□ -0.38
SPG11-201ENST00000261866 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.71□□□□□ -0.38
SPG11-201ENST00000261866 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 CAV1Q03135 178 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 TBL3Q12788 808 aaKnown RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 ZNF177Q13360 481 aaPredicted RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 TSSK1BQ9BXA7 367 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 FHDC1Q9C0D6 1143 aaPredicted RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 NIF3L1Q9GZT8 377 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 ZCCHC17Q9NP64 241 aaKnown RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 NPHS2Q9NP85 383 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 ZC4H2Q9NQZ6 224 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 HOXA7P31268 230 aaPredicted RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 NT5C2P49902 561 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 PPP2R2AP63151 447 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 ATL2Q8NHH9 583 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 CDCA5Q96FF9 252 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 TIPINQ9BVW5 301 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 PDGFDQ9GZP0 370 aaPredicted RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 NEU2Q9Y3R4 380 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 NDUFB5O43674 189 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 SHCBP1Q8NEM2 672 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 ARHGEF26Q96DR7 871 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 APOL2Q9BQE5 337 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 CCSER1Q9C0I3 900 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 EML4Q9HC35 981 aaKnown RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 CRLS1Q9UJA2 301 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 CNTNAP2Q9UHC6 1331 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 LAYNQ6UX15 382 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 GTF3C2Q8WUA4 911 aaPredicted RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 NAF1Q96HR8 494 aaKnown RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 RTFDC1Q9BY42 306 aaPredicted RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 SMPD4Q9NXE4 827 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 WTIPA6NIX2 430 aaPredicted RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 DNAJC8O75937 253 aaPredicted RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 MCF2P10911 925 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 DDX39BQ13838 428 aaKnown RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 CBWD1Q9BRT8 395 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 LCMT1Q9UIC8 334 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 PDS5AQ29RF7 1337 aaKnown RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 LZTS3O60299 673 aaPredicted RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 RHOBTB1O94844 696 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 URODP06132 367 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 VEGFAP15692 232 aaPredicted RBP12.7□□□□□ -0.38
SPG11-201ENST00000261866 RBM15Q96T37 977 aaKnown RBP eCLIP12.7□□□□□ -0.389e-7■■■■□ 22.2
SPG11-201ENST00000261866 TRABDQ9H4I3 376 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 UBP1Q9NZI7 540 aa12.7□□□□□ -0.38
SPG11-201ENST00000261866 SUPT20HL2P0C7V6 817 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 CARSP49589 748 aaKnown RBP12.69□□□□□ -0.38
SPG11-201ENST00000261866 DDX42Q86XP3 938 aaKnown RBP eCLIP12.69□□□□□ -0.38
SPG11-201ENST00000261866 CEP41Q9BYV8 373 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 HPS5Q9UPZ3 1129 aa12.69□□□□□ -0.38
SPG11-201ENST00000261866 C5orf58C9J3I9 102 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms