RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SPATA31A1Q5TZJ5 1347 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 GOLGA8TH3BQL2 631 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 CYB561D2O14569 222 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 PRPSAP2O60256 369 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 PHKA2P46019 1235 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 GSCP56915 257 aaPredicted RBP10.6□□□□□ -0.71
PALB2-201ENST00000261584 WDR4P57081 412 aaKnown RBP10.6□□□□□ -0.71
PALB2-201ENST00000261584 RPL10AP62906 217 aaKnown RBP10.6□□□□□ -0.71
PALB2-201ENST00000261584 SLC25A3Q00325 362 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 ZNF699Q32M78 642 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 HABP4Q5JVS0 413 aaKnown RBP10.6□□□□□ -0.71
PALB2-201ENST00000261584 SNRNP48Q6IEG0 339 aaKnown RBP10.6□□□□□ -0.71
PALB2-201ENST00000261584 MCOLN2Q8IZK6 566 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 NSL1Q96IY1 281 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 APOL2Q9BQE5 337 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 ZC3H7BQ9UGR2 993 aaKnown RBP10.6□□□□□ -0.71
PALB2-201ENST00000261584 A0A0A6YYK5 440 aaPredicted RBP10.6□□□□□ -0.71
PALB2-201ENST00000261584 FCHO1O14526 889 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 XPO1O14980 1071 aaKnown RBP10.6□□□□□ -0.71
PALB2-201ENST00000261584 ELK3P41970 407 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 PTGIRP43119 386 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 IRX1P78414 480 aaPredicted RBP10.6□□□□□ -0.71
PALB2-201ENST00000261584 ORC2Q13416 577 aaPredicted RBP10.6□□□□□ -0.71
PALB2-201ENST00000261584 ACAP1Q15027 740 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 LCA5Q86VQ0 697 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 ATP6V0A1Q93050 837 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 RBM41Q96IZ5 413 aaKnown RBP10.6□□□□□ -0.71
PALB2-201ENST00000261584 BATF3Q9NR55 127 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 RNF146Q9NTX7 359 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 SEL1LQ9UBV2 794 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 TSR3Q9UJK0 312 aaKnown RBP10.6□□□□□ -0.71
PALB2-201ENST00000261584 CHKBQ9Y259 395 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 PCDHB2Q9Y5E7 798 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 ATP9BO43861 1147 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 TPST1O60507 370 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 KRT37O76014 449 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 NUDT17P0C025 328 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 ENO3P13929 434 aaPredicted RBP10.6□□□□□ -0.71
PALB2-201ENST00000261584 ALDH1B1P30837 517 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 FSTL1Q12841 308 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 SEMA3FQ13275 785 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 MTFR1Q15390 333 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 MMEL1Q495T6 779 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 HERPUD2Q9BSE4 406 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 DHX35Q9H5Z1 703 aaKnown RBP10.6□□□□□ -0.71
PALB2-201ENST00000261584 MAN1C1Q9NR34 630 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 APPL1Q9UKG1 709 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 PCDHA2Q9Y5H9 948 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 AFF2P51816 1311 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 UMODL1Q5DID0 1318 aa10.6□□□□□ -0.71
PALB2-201ENST00000261584 CREB3O43889 395 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 STAMBPO95630 424 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 GSTA1P08263 222 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 GYS1P13807 737 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 ITGB5P18084 799 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 VHLP40337 213 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 NR1H3Q13133 447 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 MMRN1Q13201 1228 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 TXNRD3NBQ6F5E7 133 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 TTLL6Q8N841 843 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 FEZF2Q8TBJ5 459 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 ART4Q93070 314 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 MXRA8Q9BRK3 442 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 POLR3CQ9BUI4 534 aaPredicted RBP10.59□□□□□ -0.71
PALB2-201ENST00000261584 PARVAQ9NVD7 372 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 E9PBE3 544 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 ADCY3O60266 1144 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 KLHL41O60662 606 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 TNNC2P02585 160 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 PEX5P50542 639 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 GEMIN4P57678 1058 aaKnown RBP10.59□□□□□ -0.71
PALB2-201ENST00000261584 UBAP2LQ14157 1087 aaKnown RBP10.59□□□□□ -0.71
PALB2-201ENST00000261584 ZBTB41Q5SVQ8 909 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 UTS2BQ765I0 119 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 RASGEF1CQ8N431 466 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 RYBPQ8N488 228 aaPredicted RBP10.59□□□□□ -0.71
PALB2-201ENST00000261584 TEX9Q8N6V9 391 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 MORC4Q8TE76 937 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 TMEM8AQ9HCN3 771 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 PICK1Q9NRD5 415 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 OLFML3Q9NRN5 406 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.59□□□□□ -0.71
PALB2-201ENST00000261584 CLIC5Q9NZA1 410 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 TMEM59LQ9UK28 342 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 FAF1Q9UNN5 650 aaPredicted RBP10.59□□□□□ -0.71
PALB2-201ENST00000261584 V9GYQ6 96 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 TOP3BO95985 862 aaKnown RBP10.59□□□□□ -0.71
PALB2-201ENST00000261584 MAPK10P53779 464 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 BCAR1P56945 870 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 ZNF200P98182 395 aaPredicted RBP10.59□□□□□ -0.71
PALB2-201ENST00000261584 BNIP1Q12981 228 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 SLC12A1Q13621 1099 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 KBTBD12Q3ZCT8 623 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 RNF149Q8NC42 400 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 RNF169Q8NCN4 708 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 USP13Q92995 863 aaPredicted RBP10.59□□□□□ -0.71
PALB2-201ENST00000261584 ATP2A3Q93084 1043 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 FAM136AQ96C01 138 aa10.59□□□□□ -0.71
PALB2-201ENST00000261584 TMA16Q96EY4 203 aaKnown RBP10.59□□□□□ -0.71
PALB2-201ENST00000261584 PRR11Q96HE9 360 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms