RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 GOLGA8JA6NMD2 632 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 IRF6O14896 467 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 NVLO15381 856 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 PRPF4O43172 522 aaKnown RBP eCLIP11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 THAP12O43422 761 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 SORBS3O60504 671 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 ASMTLO95671 621 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 T-ENOLP0DO92 83 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 GM2AP17900 193 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 VHLP40337 213 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 BPIFB4P59827 614 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 CLDN10P78369 228 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 OCRLQ01968 901 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 KRT17Q04695 432 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 PSMD6Q15008 389 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 MTERF2Q49AM1 385 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 OR52E8Q6IFG1 317 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 PPP1R2P3Q6NXS1 205 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 SESTD1Q86VW0 696 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 ERO1BQ86YB8 467 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 DHX37Q8IY37 1157 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 RPUSD2Q8IZ73 545 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 PPM1KQ8N3J5 372 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 NLGN2Q8NFZ4 835 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 DEPTORQ8TB45 409 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 ZNF398Q8TD17 642 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 EPS8L1Q8TE68 723 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 IFT43Q96FT9 208 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 FAM210AQ96ND0 272 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 TUBB6Q9BUF5 446 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 TRAIPQ9BWF2 469 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 FOXP3Q9BZS1 431 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 SPATC1LQ9H0A9 340 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 TMEM134Q9H6X4 195 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 MLXIPLQ9NP71 852 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 NINJ2Q9NZG7 142 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 HAO1Q9UJM8 370 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 PHTF1Q9UMS5 762 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 PTPN22Q9Y2R2 807 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 C2CD2Q9Y426 696 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 A0A0G2JLL6 359 aaPredicted RBP11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 ABHD2P08910 425 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 SKIP12755 728 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 IVDP26440 423 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 TARSP26639 723 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 MARK3P27448 753 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 KCNJ1P48048 391 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 DYNC1I2Q13409 638 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 MESDQ14696 234 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 MUM1Q2TAK8 710 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 SLC45A4Q5BKX6 768 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 SLC39A4Q6P5W5 647 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 PRRT2Q7Z6L0 340 aaPredicted RBP11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 ZNF677Q86XU0 584 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 CYP4X1Q8N118 509 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 DRAXINQ8NBI3 349 aaPredicted RBP11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 HELQQ8TDG4 1101 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 DENND1AQ8TEH3 1009 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 CCDC127Q96BQ5 260 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 FNBP1Q96RU3 617 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 KIFC3Q9BVG8 833 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 C1orf112Q9NSG2 853 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 SCOCQ9UIL1 159 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 NOCTQ9UK39 431 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 SIP14410 1827 aa11.41□□□□□ -0.58
CHRNA1-201ENST00000261007 TCRBV7S2A1N4TA0A589 114 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 SIGLEC16A6NMB1 481 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 EDF1O60869 148 aaKnown RBP11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 PDHA1P08559 390 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 CHKAP35790 457 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 ARL2P36404 184 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 TUBP50607 506 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 WDR4P57081 412 aaKnown RBP11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 CDR2Q01850 454 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 RNASELQ05823 741 aaKnown RBP11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 SPARCL1Q14515 664 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 KYNUQ16719 465 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 WDR44Q5JSH3 913 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 SV2AQ7L0J3 742 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 TRMT1LQ7Z2T5 733 aaKnown RBP11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 PALB2Q86YC2 1186 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 SRRM1Q8IYB3 904 aaKnown RBP11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 ANKRD13AQ8IZ07 590 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 LRRC8CQ8TDW0 803 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 MAML1Q92585 1016 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 DTNBP1Q96EV8 351 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 TRIM11Q96F44 468 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 FAM192AQ9GZU8 254 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 DENND2DQ9H6A0 471 aaPredicted RBP11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 SENP1Q9P0U3 644 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 UVRAGQ9P2Y5 699 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 ASIC3Q9UHC3 531 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 SBF1O95248 1867 aa11.4□□□□□ -0.58
CHRNA1-201ENST00000261007 TMEM110-MUSTN1A8MSY1 372 aa11.39□□□□□ -0.59
CHRNA1-201ENST00000261007 K7ERI5 159 aa11.39□□□□□ -0.59
CHRNA1-201ENST00000261007 FARP2O94887 1054 aaPredicted RBP11.39□□□□□ -0.59
CHRNA1-201ENST00000261007 GAS8O95995 478 aa11.39□□□□□ -0.59
CHRNA1-201ENST00000261007 CYP1A2P05177 515 aa11.39□□□□□ -0.59
CHRNA1-201ENST00000261007 UBA1P22314 1058 aaKnown RBP11.39□□□□□ -0.59
CHRNA1-201ENST00000261007 EFNA5P52803 228 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms