RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 GOLGA6AQ9NYA3 693 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 ERAP1Q9NZ08 941 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 COL1A2P08123 1366 aa18.77■□□□□ 0.59
SSB-201ENST00000260956 TRIM43BA6NCK2 446 aa18.76■□□□□ 0.59
SSB-201ENST00000260956 CD4P01730 458 aa18.76■□□□□ 0.59
SSB-201ENST00000260956 KRT14P02533 472 aa18.76■□□□□ 0.59
SSB-201ENST00000260956 MMP8P22894 467 aa18.76■□□□□ 0.59
SSB-201ENST00000260956 SLC1A1P43005 524 aa18.76■□□□□ 0.59
SSB-201ENST00000260956 ZNF200P98182 395 aaPredicted RBP18.76■□□□□ 0.59
SSB-201ENST00000260956 MAMLD1Q13495 774 aa18.76■□□□□ 0.59
SSB-201ENST00000260956 ZNF568Q3ZCX4 644 aa18.76■□□□□ 0.59
SSB-201ENST00000260956 SPDYCQ5MJ68 293 aa18.76■□□□□ 0.59
SSB-201ENST00000260956 TRIM43Q96BQ3 446 aaPredicted RBP18.76■□□□□ 0.59
SSB-201ENST00000260956 LRRC19Q9H756 370 aa18.76■□□□□ 0.59
SSB-201ENST00000260956 SIX4Q9UIU6 781 aa18.76■□□□□ 0.59
SSB-201ENST00000260956 ZMYND8Q9ULU4 1186 aaPredicted RBP18.76■□□□□ 0.59
SSB-201ENST00000260956 UTP11Q9Y3A2 253 aaKnown RBP18.76■□□□□ 0.59
SSB-201ENST00000260956 RALGAPA2Q2PPJ7 1873 aa18.76■□□□□ 0.59
SSB-201ENST00000260956 INSRRP14616 1297 aa18.75■□□□□ 0.59
SSB-201ENST00000260956 MAN1A1P33908 653 aa18.75■□□□□ 0.59
SSB-201ENST00000260956 ACTN2P35609 894 aa18.75■□□□□ 0.59
SSB-201ENST00000260956 FNTAP49354 379 aa18.75■□□□□ 0.59
SSB-201ENST00000260956 DUOXA2Q1HG44 320 aa18.75■□□□□ 0.59
SSB-201ENST00000260956 C2CD6Q53TS8 623 aa18.75■□□□□ 0.59
SSB-201ENST00000260956 GDF6Q6KF10 455 aaPredicted RBP18.75■□□□□ 0.59
SSB-201ENST00000260956 PPP1R2P3Q6NXS1 205 aa18.75■□□□□ 0.59
SSB-201ENST00000260956 PASD1Q8IV76 773 aa18.75■□□□□ 0.59
SSB-201ENST00000260956 TMEM192Q8IY95 271 aa18.75■□□□□ 0.59
SSB-201ENST00000260956 FAM76AQ8TAV0 307 aa18.75■□□□□ 0.59
SSB-201ENST00000260956 ZNF606Q8WXB4 792 aa18.75■□□□□ 0.59
SSB-201ENST00000260956 LRRC45Q96CN5 670 aa18.75■□□□□ 0.59
SSB-201ENST00000260956 NLRP4Q96MN2 994 aa18.75■□□□□ 0.59
SSB-201ENST00000260956 C11orf70Q9BRQ4 267 aa18.75■□□□□ 0.59
SSB-201ENST00000260956 DPH5Q9H2P9 285 aa18.75■□□□□ 0.59
SSB-201ENST00000260956 PLAAQ9Y263 795 aa18.75■□□□□ 0.59
SSB-201ENST00000260956 ERICH4A6NGS2 130 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 TULP1O00294 542 aaPredicted RBP18.74■□□□□ 0.59
SSB-201ENST00000260956 LSM8O95777 96 aaKnown RBP18.74■□□□□ 0.59
SSB-201ENST00000260956 COILP38432 576 aaPredicted RBP18.74■□□□□ 0.59
SSB-201ENST00000260956 MMS22LQ6ZRQ5 1243 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 TOX2Q96NM4 488 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 BCO2Q9BYV7 579 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 O00370 1275 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 TP73O15350 636 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 THAP12O43422 761 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 TAS2R40P59535 323 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 ZNF844Q08AG5 666 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 ZNF252P-AS1Q0IIN9 211 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 KLF1Q13351 362 aaPredicted RBP18.74■□□□□ 0.59
SSB-201ENST00000260956 SGSM1Q2NKQ1 1148 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 FAM47CQ5HY64 1035 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 PPP1R15BQ5SWA1 713 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 TFAP2BQ92481 460 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 MAGOHBQ96A72 148 aaKnown RBP18.74■□□□□ 0.59
SSB-201ENST00000260956 ZNF668Q96K58 619 aaPredicted RBP18.74■□□□□ 0.59
SSB-201ENST00000260956 TMBIM4Q9HC24 238 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 CISHQ9NSE2 258 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 PRMT7Q9NVM4 692 aaPredicted RBP18.74■□□□□ 0.59
SSB-201ENST00000260956 ADAM22Q9P0K1 906 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 PCDHGC3Q9UN70 934 aa18.74■□□□□ 0.59
SSB-201ENST00000260956 CYP2C9P11712 490 aa18.73■□□□□ 0.59
SSB-201ENST00000260956 RPL21P46778 160 aaKnown RBP18.73■□□□□ 0.59
SSB-201ENST00000260956 WDTC1Q8N5D0 677 aa18.73■□□□□ 0.59
SSB-201ENST00000260956 TCHPQ9BT92 498 aa18.73■□□□□ 0.59
SSB-201ENST00000260956 IMPG2Q9BZV3 1241 aa18.73■□□□□ 0.59
SSB-201ENST00000260956 PDZD7Q9H5P4 517 aa18.73■□□□□ 0.59
SSB-201ENST00000260956 GTF2IRD1Q9UHL9 959 aa18.73■□□□□ 0.59
SSB-201ENST00000260956 TBX21Q9UL17 535 aa18.73■□□□□ 0.59
SSB-201ENST00000260956 INO80B-WBP1J3KQ70 363 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 PSTPIP1O43586 416 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 IL18RAPO95256 599 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 SMIM10L2AP0DMW4 78 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 SMIM10L2BP0DMW5 78 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 CXCL8P10145 99 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 HOXC8P31273 242 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 PHKA2P46019 1235 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 MTMR3Q13615 1198 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 LIN9Q5TKA1 542 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 CCDC137Q6PK04 289 aaKnown RBP18.72■□□□□ 0.59
SSB-201ENST00000260956 LRRC31Q6UY01 552 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 SESTD1Q86VW0 696 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 CDR2LQ86X02 465 aaPredicted RBP18.72■□□□□ 0.59
SSB-201ENST00000260956 THNSL1Q8IYQ7 743 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 SH2D3CQ8N5H7 860 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 WNT8BQ93098 351 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 FAXDC2Q96IV6 333 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 RUNDC3BQ96NL0 473 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 INO80BQ9C086 356 aaPredicted RBP18.72■□□□□ 0.59
SSB-201ENST00000260956 SZT2Q5T011 3432 aa18.72■□□□□ 0.59
SSB-201ENST00000260956 MYO1FO00160 1098 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 MAGEB2O15479 319 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 NFICP08651 508 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 CLTBP09497 229 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 MCF2P10911 925 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 BRD2P25440 801 aaKnown RBP18.71■□□□□ 0.59
SSB-201ENST00000260956 SSTR3P32745 418 aaPredicted RBP18.71■□□□□ 0.59
SSB-201ENST00000260956 MARCH8Q5T0T0 291 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 DAB2IPQ5VWQ8 1189 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 ANKS1BQ7Z6G8 1248 aa18.71■□□□□ 0.59
SSB-201ENST00000260956 PHLDB2Q86SQ0 1253 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms