RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 ZNF396Q96N95 335 aaPredicted RBP18.19■□□□□ 0.5
CGREF1-201ENST00000260595 TRIM9Q9C026 710 aa18.19■□□□□ 0.5
CGREF1-201ENST00000260595 PDE11AQ9HCR9 933 aa18.19■□□□□ 0.5
CGREF1-201ENST00000260595 SIX4Q9UIU6 781 aa18.19■□□□□ 0.5
CGREF1-201ENST00000260595 NDRG2Q9UN36 371 aaKnown RBP18.19■□□□□ 0.5
CGREF1-201ENST00000260595 L1RE1Q9UN81 338 aa18.19■□□□□ 0.5
CGREF1-201ENST00000260595 PIAS3Q9Y6X2 628 aa18.19■□□□□ 0.5
CGREF1-201ENST00000260595 MIA3Q5JRA6 1907 aa18.19■□□□□ 0.5
CGREF1-201ENST00000260595 CHADO15335 359 aa18.18■□□□□ 0.5
CGREF1-201ENST00000260595 WEE1P30291 646 aa18.18■□□□□ 0.5
CGREF1-201ENST00000260595 CSTF1Q05048 431 aaKnown RBP18.18■□□□□ 0.5
CGREF1-201ENST00000260595 MTAPQ13126 283 aa18.18■□□□□ 0.5
CGREF1-201ENST00000260595 CNNM4Q6P4Q7 775 aa18.18■□□□□ 0.5
CGREF1-201ENST00000260595 DCP1BQ8IZD4 617 aaKnown RBP18.18■□□□□ 0.5
CGREF1-201ENST00000260595 GPD1LQ8N335 351 aa18.18■□□□□ 0.5
CGREF1-201ENST00000260595 CSGALNACT2Q8N6G5 542 aa18.18■□□□□ 0.5
CGREF1-201ENST00000260595 SUMF1Q8NBK3 374 aa18.18■□□□□ 0.5
CGREF1-201ENST00000260595 FAM200AQ8TCP9 573 aa18.18■□□□□ 0.5
CGREF1-201ENST00000260595 GIPC2Q8TF65 315 aa18.18■□□□□ 0.5
CGREF1-201ENST00000260595 PKMYT1Q99640 499 aa18.18■□□□□ 0.5
CGREF1-201ENST00000260595 CUEDC2Q9H467 287 aa18.18■□□□□ 0.5
CGREF1-201ENST00000260595 TASP1Q9H6P5 420 aa18.18■□□□□ 0.5
CGREF1-201ENST00000260595 PRMT8Q9NR22 394 aaPredicted RBP18.18■□□□□ 0.5
CGREF1-201ENST00000260595 GDAP2Q9NXN4 497 aa18.18■□□□□ 0.5
CGREF1-201ENST00000260595 OBP2AQ9NY56 170 aa18.18■□□□□ 0.5
CGREF1-201ENST00000260595 ABI2Q9NYB9 513 aaPredicted RBP18.18■□□□□ 0.5
CGREF1-201ENST00000260595 ITGA11Q9UKX5 1188 aa18.18■□□□□ 0.5
CGREF1-201ENST00000260595 FAM186AA6NE01 2351 aa18.18■□□□□ 0.5
CGREF1-201ENST00000260595 KIAA0391O15091 583 aaKnown RBP18.17■□□□□ 0.5
CGREF1-201ENST00000260595 CUTAO60888 179 aa18.17■□□□□ 0.5
CGREF1-201ENST00000260595 PRAMEF12O95522 483 aa18.17■□□□□ 0.5
CGREF1-201ENST00000260595 HMGA1P17096 107 aaKnown RBP18.17■□□□□ 0.5
CGREF1-201ENST00000260595 CYP4F8P98187 520 aa18.17■□□□□ 0.5
CGREF1-201ENST00000260595 VEPH1Q14D04 833 aa18.17■□□□□ 0.5
CGREF1-201ENST00000260595 MAMSTRQ6ZN01 415 aa18.17■□□□□ 0.5
CGREF1-201ENST00000260595 EPM2AIP1Q7L775 607 aaPredicted RBP18.17■□□□□ 0.5
CGREF1-201ENST00000260595 TMEM150AQ86TG1 271 aa18.17■□□□□ 0.5
CGREF1-201ENST00000260595 ZBTB44Q8NCP5 570 aa18.17■□□□□ 0.5
CGREF1-201ENST00000260595 DHX58Q96C10 678 aa18.17■□□□□ 0.5
CGREF1-201ENST00000260595 ACBD6Q9BR61 282 aa18.17■□□□□ 0.5
CGREF1-201ENST00000260595 SLC46A2Q9BY10 475 aa18.17■□□□□ 0.5
CGREF1-201ENST00000260595 MTMR12Q9C0I1 747 aa18.17■□□□□ 0.5
CGREF1-201ENST00000260595 LRRC27Q9C0I9 530 aa18.17■□□□□ 0.5
CGREF1-201ENST00000260595 CHRDQ9H2X0 955 aa18.17■□□□□ 0.5
CGREF1-201ENST00000260595 PCDHB5Q9Y5E4 795 aa18.17■□□□□ 0.5
CGREF1-201ENST00000260595 PTPRJQ12913 1337 aa18.17■□□□□ 0.5
CGREF1-201ENST00000260595 PATJQ8NI35 1801 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 TULP1O00294 542 aaPredicted RBP18.16■□□□□ 0.5
CGREF1-201ENST00000260595 GABRDO14764 452 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 CHRNB1P11230 501 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 CCNE1P24864 410 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 CDC25CP30307 473 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 GPR15P49685 360 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 RBP5P82980 135 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 ARHGAP15Q53QZ3 475 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 LMBRD2Q68DH5 695 aaPredicted RBP18.16■□□□□ 0.5
CGREF1-201ENST00000260595 TSSK4Q6SA08 328 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 OSTM1Q86WC4 334 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 CBWD2Q8IUF1 395 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 YAF2Q8IY57 180 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 TMEM86AQ8N2M4 240 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 IQUBQ8NA54 791 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 ZNF507Q8TCN5 953 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 LEO1Q8WVC0 666 aaPredicted RBP18.16■□□□□ 0.5
CGREF1-201ENST00000260595 C7orf25Q9BPX7 421 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 LMAN1LQ9HAT1 526 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 INTS13Q9NVM9 706 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 DDX43Q9NXZ2 648 aaKnown RBP18.16■□□□□ 0.5
CGREF1-201ENST00000260595 PCDHGA2Q9Y5H1 932 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 FANCMQ8IYD8 2048 aa18.16■□□□□ 0.5
CGREF1-201ENST00000260595 EIF3DO15371 548 aaKnown RBP eCLIP18.15■□□□□ 0.5
CGREF1-201ENST00000260595 TGFB1I1O43294 461 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 KINO60870 393 aaKnown RBP18.15■□□□□ 0.5
CGREF1-201ENST00000260595 HUS1O60921 280 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 LILRB5O75023 590 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 F11P03951 625 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 TDGF1P13385 188 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 ACAT1P24752 427 aaKnown RBP18.15■□□□□ 0.5
CGREF1-201ENST00000260595 SOX9P48436 509 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 AMPD3Q01432 767 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 TSPY1Q01534 308 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 EHHADHQ08426 723 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 BFSP1Q12934 665 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 NFE2Q16621 373 aaPredicted RBP18.15■□□□□ 0.5
CGREF1-201ENST00000260595 SOWAHAQ2M3V2 549 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 WDR44Q5JSH3 913 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 INTS6LQ5JSJ4 861 aaKnown RBP18.15■□□□□ 0.5
CGREF1-201ENST00000260595 FOXD4L5Q5VV16 416 aaPredicted RBP18.15■□□□□ 0.5
CGREF1-201ENST00000260595 STXBP4Q6ZWJ1 553 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 LIMS2Q7Z4I7 341 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 TOP6BLQ8N6T0 577 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 OR5B17Q8NGF7 314 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 CSGALNACT1Q8TDX6 532 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 NOC3LQ8WTT2 800 aaKnown RBP18.15■□□□□ 0.5
CGREF1-201ENST00000260595 FOXD4L4Q8WXT5 416 aaPredicted RBP18.15■□□□□ 0.5
CGREF1-201ENST00000260595 MSANTD3Q96H12 275 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 ZFYVE19Q96K21 471 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 PI4K2AQ9BTU6 479 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 ZSCAN32Q9NX65 697 aa18.15■□□□□ 0.5
CGREF1-201ENST00000260595 HSPBP1Q9NZL4 362 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms