RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 USP17L22D6RA61 530 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 USP17L17D6RBQ6 530 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 USP17L19D6RCP7 530 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 USP17L20D6RJB6 530 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 RNF103O00237 685 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 NBNO60934 754 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 WBP4O75554 376 aaKnown RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 GUCA1CO95843 209 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 NCKAP1LP55160 1127 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 USP17L24Q0WX57 530 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 MEI1Q5TIA1 1274 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 CACHD1Q5VU97 1274 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 BTBD8Q5XKL5 378 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 USP17L6PQ6QN14 398 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 BBS7Q8IWZ6 715 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 TPCN2Q8NHX9 752 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 HPS3Q969F9 1004 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 TRIM51Q9BSJ1 452 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 LAMB4A4D0S4 1761 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 ADGRA2Q96PE1 1338 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 NMT2O60551 498 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 MUTP22033 750 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 GTF2H1P32780 548 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 LRRC36Q1X8D7 754 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 FAM83EQ2M2I3 478 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 SGSM1Q2NKQ1 1148 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 ST13P5Q8NFI4 369 aaPredicted RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 EPC1Q9H2F5 836 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 DBNDD1Q9H9R9 158 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 DCP1AQ9NPI6 582 aaPredicted RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 DYRK4Q9NR20 520 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 RAB6BQ9NRW1 208 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 CYP26A1O43174 497 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 SASH1O94885 1247 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 RHOBTB3O94955 611 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 GRIK1P39086 918 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 C6orf10Q5SRN2 563 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 VPS37AQ8NEZ2 397 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 RIN3Q8TB24 985 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 SPATA17Q96L03 361 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 GTF3C5Q9Y5Q8 519 aaPredicted RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 UCHL3P15374 230 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 IRAK1P51617 712 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 ITGA8P53708 1063 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 SNX17Q15036 470 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 THEMIS2Q5TEJ8 643 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 NYAP1Q6ZVC0 841 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 CCDC60Q8IWA6 550 aaPredicted RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 CPA5Q8WXQ8 436 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 SH3GL1Q99961 368 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 ILKAPQ9H0C8 392 aaPredicted RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 PKP3Q9Y446 797 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 ERCC6L2Q5T890 1561 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 ERBB3P21860 1342 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 C3P01024 1663 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 KANSL1LA0AUZ9 987 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 A8MXQ7 604 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 EVPLLA8MZ36 301 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 KIF28PB7ZC32 967 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 TRIM66O15016 1216 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 EXTL3O43909 919 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 GYPCP04921 128 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 TRIM49P0CI25 452 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 TRIM49CP0CI26 452 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 HNRNPH1P31943 449 aaKnown RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 RXRGP48443 463 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 PSMC6P62333 389 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 EXOSC10Q01780 885 aaKnown RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 ILF2Q12905 390 aaKnown RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 MTF1Q14872 753 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 TRIM71Q2Q1W2 868 aaKnown RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 TFDP3Q5H9I0 405 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 KLHL11Q9NVR0 708 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 AFF4Q9UHB7 1163 aaKnown RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 ZDHHC9Q9Y397 364 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 CACNA1CQ13936 2221 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 TMEM131LA2VDJ0 1609 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 MAPK1P28482 360 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 NPEPPSP55786 919 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 RBP5P82980 135 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 ZCWPW2Q504Y3 356 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 WDR93Q6P2C0 686 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 CYB5D1Q6P9G0 228 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 TRIM65Q6PJ69 517 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 NUDT18Q6ZVK8 323 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 NLRP9Q7RTR0 991 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 KIF2BQ8N4N8 673 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 USP13Q92995 863 aaPredicted RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 UBE2OQ9C0C9 1292 aaKnown RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 CARD9Q9H257 536 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 DCLRE1BQ9H816 532 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 ACAD9Q9H845 621 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 UBTFL6P0CB48 400 aaPredicted RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 NUP62P37198 522 aaPredicted RBP5□□□□□ -1.61
RC3H1-201ENST00000258349 SNAP25P60880 206 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 STX5Q13190 355 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 HOMEZQ8IX15 550 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 FAM9CQ8IZT9 166 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 MASTLQ96GX5 879 aa5□□□□□ -1.61
RC3H1-201ENST00000258349 CATSPER2Q96P56 530 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms