RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 CD44P16070 742 aaKnown RBP12.44□□□□□ -0.42
CCNA1-201ENST00000255465 EPHB2P29323 1055 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 ETV3P41162 512 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 HSD17B4P51659 736 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 CHN2P52757 468 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 DRG2P55039 364 aaKnown RBP12.44□□□□□ -0.42
CCNA1-201ENST00000255465 CDR2Q01850 454 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 SEC23AQ15436 765 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 TGFBIQ15582 683 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 HERC4Q5GLZ8 1057 aaPredicted RBP12.44□□□□□ -0.42
CCNA1-201ENST00000255465 PPP1R21Q6ZMI0 780 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 ANKLE1Q8NAG6 615 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 PTCD2Q8WV60 388 aaKnown RBP12.44□□□□□ -0.42
CCNA1-201ENST00000255465 ATG4CQ96DT6 458 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 TRIM47Q96LD4 638 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 BTBD9Q96Q07 612 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 TCF12Q99081 682 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 EDEM3Q9BZQ6 932 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 IMPG2Q9BZV3 1241 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 CUEDC2Q9H467 287 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 TAB2Q9NYJ8 693 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 KLHL3Q9UH77 587 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 ADAMTS5Q9UNA0 930 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 DUSP10Q9Y6W6 482 aa12.44□□□□□ -0.42
CCNA1-201ENST00000255465 PVALEFA0A1B0GWK0 134 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 NOTOA8MTQ0 251 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 HGSO14964 777 aaPredicted RBP12.43□□□□□ -0.42
CCNA1-201ENST00000255465 TSPAN1O60635 241 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 PABPC1P11940 636 aaKnown RBP12.43□□□□□ -0.42
CCNA1-201ENST00000255465 CCNCP24863 283 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 GSSP48637 474 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 HNRNPFP52597 415 aaKnown RBP12.43□□□□□ -0.42
CCNA1-201ENST00000255465 FCGRTP55899 365 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 ANTXR2P58335 489 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 NAA20P61599 178 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 IRX4P78413 519 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 CLUL1Q15846 466 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 SLC45A4Q5BKX6 768 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 MEI1Q5TIA1 1274 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 PPP2R2DQ66LE6 453 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 RBM44Q6ZP01 1051 aaKnown RBP12.43□□□□□ -0.42
CCNA1-201ENST00000255465 KCTD1Q719H9 257 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 ITIH5Q86UX2 942 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 FAM20CQ8IXL6 584 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 CSGALNACT2Q8N6G5 542 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 TMCO5AQ8N6Q1 288 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 PNMA1Q8ND90 353 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 DCAF4Q8WV16 495 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 ATL1Q8WXF7 558 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 BORCS5Q969J3 196 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 OSBPL6Q9BZF3 934 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 ZMYND12Q9H0C1 365 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 FBXO2Q9UK22 296 aaPredicted RBP12.43□□□□□ -0.42
CCNA1-201ENST00000255465 FEM1BQ9UK73 627 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 PLAGL2Q9UPG8 496 aa12.43□□□□□ -0.42
CCNA1-201ENST00000255465 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.43□□□□□ -0.42
CCNA1-201ENST00000255465 SSU72P8A0A1W2PR75 194 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 ANKRD34BA5PLL1 514 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 BTNL10A8MVZ5 291 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 RBAK-RBAKDNI3L0D1 243 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 ALOX15BO15296 676 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 PHF2O75151 1096 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 GNRH1P01148 92 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 KRT6AP02538 564 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 KRT6BP04259 564 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 UQCRBP14927 111 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 CDH3P22223 829 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 KRT6CP48668 564 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 DR1Q01658 176 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 GRIN1Q05586 938 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 DPYDQ12882 1025 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 PDAP1Q13442 181 aaKnown RBP12.42□□□□□ -0.42
CCNA1-201ENST00000255465 IFIT1BQ5T764 474 aaKnown RBP12.42□□□□□ -0.42
CCNA1-201ENST00000255465 SPOPLQ6IQ16 392 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 TMEM214Q6NUQ4 689 aaKnown RBP12.42□□□□□ -0.42
CCNA1-201ENST00000255465 RGS9BPQ6ZS82 235 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 SATL1Q86VE3 508 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 FMO2Q99518 471 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 DDX50Q9BQ39 737 aaKnown RBP12.42□□□□□ -0.42
CCNA1-201ENST00000255465 MCOLN1Q9GZU1 580 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 MLXIPQ9HAP2 919 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 C12orf10Q9HB07 376 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 COMMD8Q9NX08 183 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 TDRKHQ9Y2W6 561 aaKnown RBP12.42□□□□□ -0.42
CCNA1-201ENST00000255465 SRPRBQ9Y5M8 271 aaKnown RBP12.42□□□□□ -0.42
CCNA1-201ENST00000255465 AK5Q9Y6K8 562 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 ATP8B3O60423 1300 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 GOLGA8BA8MQT2 603 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 E9PMD0 336 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 VWA5AO00534 786 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 FKBP6O75344 327 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 SNHG28P0DPA3 235 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 M6PRP20645 277 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 CXCR5P32302 372 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 MAGEA1P43355 309 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 PCYT1AP49585 367 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 RAP1GDS1P52306 607 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 STAT2P52630 851 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 THOP1P52888 689 aa12.42□□□□□ -0.42
CCNA1-201ENST00000255465 AP2B1P63010 937 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms