RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 GTF2H1P32780 548 aa9.71□□□□□ -0.85
RPA1-201ENST00000254719 ALDH5A1P51649 535 aaPredicted RBP9.71□□□□□ -0.85
RPA1-201ENST00000254719 ARSEP51690 589 aa9.71□□□□□ -0.85
RPA1-201ENST00000254719 SH3PXD2AQ5TCZ1 1133 aa9.71□□□□□ -0.85
RPA1-201ENST00000254719 PPP1R21Q6ZMI0 780 aa9.71□□□□□ -0.85
RPA1-201ENST00000254719 TRIM72Q6ZMU5 477 aa9.71□□□□□ -0.85
RPA1-201ENST00000254719 NLRP14Q86W24 1093 aa9.71□□□□□ -0.85
RPA1-201ENST00000254719 GABPB2Q8TAK5 448 aaPredicted RBP9.71□□□□□ -0.85
RPA1-201ENST00000254719 MAML1Q92585 1016 aa9.71□□□□□ -0.85
RPA1-201ENST00000254719 PGM2Q96G03 612 aa9.71□□□□□ -0.85
RPA1-201ENST00000254719 KLHL14Q9P2G3 628 aa9.71□□□□□ -0.85
RPA1-201ENST00000254719 CPSF3Q9UKF6 684 aaKnown RBP9.71□□□□□ -0.85
RPA1-201ENST00000254719 ATP8A1Q9Y2Q0 1164 aa9.71□□□□□ -0.85
RPA1-201ENST00000254719 TCRBV7S3A2A0A539 114 aa9.71□□□□□ -0.86
RPA1-201ENST00000254719 AMHP03971 560 aa9.71□□□□□ -0.86
RPA1-201ENST00000254719 CHRNA3P32297 505 aa9.71□□□□□ -0.86
RPA1-201ENST00000254719 SNX1Q13596 522 aa9.71□□□□□ -0.86
RPA1-201ENST00000254719 ANKRD35Q8N283 1001 aa9.71□□□□□ -0.86
RPA1-201ENST00000254719 CCDC89Q8N998 374 aa9.71□□□□□ -0.86
RPA1-201ENST00000254719 CCDC197Q8NCU1 140 aa9.71□□□□□ -0.86
RPA1-201ENST00000254719 TRAPPC12Q8WVT3 735 aa9.71□□□□□ -0.86
RPA1-201ENST00000254719 COPS5Q92905 334 aa9.71□□□□□ -0.86
RPA1-201ENST00000254719 CEP170P1Q96L14 293 aa9.71□□□□□ -0.86
RPA1-201ENST00000254719 DCLK3Q9C098 648 aa9.71□□□□□ -0.86
RPA1-201ENST00000254719 POLR3FQ9H1D9 316 aaPredicted RBP9.71□□□□□ -0.86
RPA1-201ENST00000254719 C10orf88Q9H8K7 445 aa9.71□□□□□ -0.86
RPA1-201ENST00000254719 INTS9Q9NV88 658 aaKnown RBP9.71□□□□□ -0.86
RPA1-201ENST00000254719 BAIAP2L1Q9UHR4 511 aa9.71□□□□□ -0.86
RPA1-201ENST00000254719 F8VP50 259 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 ASAP2O43150 1006 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 SUN1O94901 812 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 HLA-DRAP01903 254 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 CD19P15391 556 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 EMC2Q15006 297 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 RELL1Q8IUW5 271 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 HVCN1Q96D96 273 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 PEBP4Q96S96 227 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 WNT8AQ9H1J5 351 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 ATP6V0A4Q9HBG4 840 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 PDGFCQ9NRA1 345 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 KANSL3Q9P2N6 904 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 SLC9A2Q9UBY0 812 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 CSADQ9Y600 493 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 TMEM191CA6NGB0 347 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 PIAS1O75925 651 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 IGHA2P01877 340 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 TMEM191BP0C7N4 346 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 TROVE2P10155 538 aaKnown RBP eCLIP9.7□□□□□ -0.86
RPA1-201ENST00000254719 PIK3CAP42336 1068 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 SARNPP82979 210 aaKnown RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 RNASELQ05823 741 aaKnown RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 GALNTL6Q49A17 601 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 MFSD5Q6N075 450 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 XRRA1Q6P2D8 792 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 GPD1LQ8N335 351 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 DENND1AQ8TEH3 1009 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 GPR20Q99678 358 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.7□□□□□ -0.86
RPA1-201ENST00000254719 FARP1Q9Y4F1 1045 aaPredicted RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 EXTL3O43909 919 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 BANF1O75531 89 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 NPTXRO95502 500 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 ASS1P00966 412 aaKnown RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 HARSP12081 509 aaKnown RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 KRT15P19012 456 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 CLNS1AP54105 237 aaKnown RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 MAP1SQ66K74 1059 aaPredicted RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 YTHDF3Q7Z739 585 aaKnown RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 PHF13Q86YI8 300 aaPredicted RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 RAB3IPQ96QF0 476 aaPredicted RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 CDC42EP4Q9H3Q1 356 aaKnown RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.7□□□□□ -0.86
RPA1-201ENST00000254719 SAE1Q9UBE0 346 aaPredicted RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 NOVA2Q9UNW9 492 aaKnown RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 SRRM3A6NNA2 597 aaPredicted RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 MED7O43513 233 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 RNF8O76064 485 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 FOXN2P32314 431 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 GPX6P59796 221 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 NR1H3Q13133 447 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 CNGA2Q16280 664 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 SGO2Q562F6 1265 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 AGBL2Q5U5Z8 902 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 HIBCHQ6NVY1 386 aaPredicted RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 VSIG1Q86XK7 387 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 MAP7D3Q8IWC1 876 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 GBP7Q8N8V2 638 aaPredicted RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 PPFIBP2Q8ND30 876 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 RDM1Q8NG50 284 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 RNF217Q8TC41 542 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 RNPEPQ9H4A4 650 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 AVENQ9NQS1 362 aaPredicted RBP9.7□□□□□ -0.86
RPA1-201ENST00000254719 GJA3Q9Y6H8 435 aa9.7□□□□□ -0.86
RPA1-201ENST00000254719 CLUHO75153 1309 aa9.69□□□□□ -0.86
RPA1-201ENST00000254719 MAFO75444 373 aaPredicted RBP9.69□□□□□ -0.86
RPA1-201ENST00000254719 FSBPO95073 299 aa9.69□□□□□ -0.86
RPA1-201ENST00000254719 AP3M2P53677 418 aa9.69□□□□□ -0.86
RPA1-201ENST00000254719 GJC2Q5T442 439 aaPredicted RBP9.69□□□□□ -0.86
RPA1-201ENST00000254719 ARHGEF18Q6ZSZ5 1173 aa9.69□□□□□ -0.86
RPA1-201ENST00000254719 ABRAQ8N0Z2 381 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms