RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 APBA1Q02410 837 aa15.06■□□□□ 0
VPS25-201ENST00000253794 SMARCB1Q12824 385 aa15.06■□□□□ 0
VPS25-201ENST00000253794 GPR17Q13304 367 aa15.06■□□□□ 0
VPS25-201ENST00000253794 INTS6LQ5JSJ4 861 aaKnown RBP15.06■□□□□ 0
VPS25-201ENST00000253794 TPGS2Q68CL5 300 aa15.06■□□□□ 0
VPS25-201ENST00000253794 IQCEQ6IPM2 695 aa15.06■□□□□ 0
VPS25-201ENST00000253794 FAM171BQ6P995 826 aa15.06■□□□□ 0
VPS25-201ENST00000253794 RRAGAQ7L523 313 aa15.06■□□□□ 0
VPS25-201ENST00000253794 KAT5Q92993 513 aa15.06■□□□□ 0
VPS25-201ENST00000253794 STK33Q9BYT3 514 aa15.06■□□□□ 0
VPS25-201ENST00000253794 EDEM3Q9BZQ6 932 aa15.06■□□□□ 0
VPS25-201ENST00000253794 SNX25Q9H3E2 840 aa15.06■□□□□ 0
VPS25-201ENST00000253794 NSUN3Q9H649 340 aaKnown RBP15.06■□□□□ 0
VPS25-201ENST00000253794 UBE2TQ9NPD8 197 aaPredicted RBP15.06■□□□□ 0
VPS25-201ENST00000253794 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.06■□□□□ 0
VPS25-201ENST00000253794 DNAJC12Q9UKB3 198 aa15.06■□□□□ 0
VPS25-201ENST00000253794 PCDHGC5Q9Y5F6 944 aa15.06■□□□□ 0
VPS25-201ENST00000253794 CDY1Q9Y6F8 540 aa15.06■□□□□ 0
VPS25-201ENST00000253794 C2CD2LO14523 706 aa15.05■□□□□ -0
VPS25-201ENST00000253794 EPHB6O15197 1021 aa15.05■□□□□ -0
VPS25-201ENST00000253794 ADAM12O43184 909 aa15.05■□□□□ -0
VPS25-201ENST00000253794 ADH1AP07327 375 aa15.05■□□□□ -0
VPS25-201ENST00000253794 LMO2P25791 158 aa15.05■□□□□ -0
VPS25-201ENST00000253794 NDST1P52848 882 aa15.05■□□□□ -0
VPS25-201ENST00000253794 JAM2P57087 298 aa15.05■□□□□ -0
VPS25-201ENST00000253794 TSPY1Q01534 308 aa15.05■□□□□ -0
VPS25-201ENST00000253794 ROR1Q01973 937 aa15.05■□□□□ -0
VPS25-201ENST00000253794 KCNC3Q14003 757 aa15.05■□□□□ -0
VPS25-201ENST00000253794 COL19A1Q14993 1142 aa15.05■□□□□ -0
VPS25-201ENST00000253794 GJB7Q6PEY0 223 aa15.05■□□□□ -0
VPS25-201ENST00000253794 LILRA6Q6PI73 481 aa15.05■□□□□ -0
VPS25-201ENST00000253794 PPFIBP1Q86W92 1011 aa15.05■□□□□ -0
VPS25-201ENST00000253794 NEK11Q8NG66 645 aa15.05■□□□□ -0
VPS25-201ENST00000253794 OR6B3Q8NGW1 331 aa15.05■□□□□ -0
VPS25-201ENST00000253794 MICAL1Q8TDZ2 1067 aa15.05■□□□□ -0
VPS25-201ENST00000253794 PPP2R3CQ969Q6 453 aa15.05■□□□□ -0
VPS25-201ENST00000253794 MRFAP1L1Q96HT8 127 aa15.05■□□□□ -0
VPS25-201ENST00000253794 TNIP3Q96KP6 325 aa15.05■□□□□ -0
VPS25-201ENST00000253794 GUCD1Q96NT3 240 aa15.05■□□□□ -0
VPS25-201ENST00000253794 SYT15Q9BQS2 421 aa15.05■□□□□ -0
VPS25-201ENST00000253794 NT5C1AQ9BXI3 368 aa15.05■□□□□ -0
VPS25-201ENST00000253794 GPR88Q9GZN0 384 aa15.05■□□□□ -0
VPS25-201ENST00000253794 FAM207AQ9NSI2 230 aaPredicted RBP15.05■□□□□ -0
VPS25-201ENST00000253794 MTMR10Q9NXD2 777 aa15.05■□□□□ -0
VPS25-201ENST00000253794 CEP72Q9P209 647 aa15.05■□□□□ -0
VPS25-201ENST00000253794 HSFX1Q9UBD0 423 aa15.05■□□□□ -0
VPS25-201ENST00000253794 HMGXB4Q9UGU5 601 aa15.05■□□□□ -0
VPS25-201ENST00000253794 AJAP1Q9UKB5 411 aaPredicted RBP15.05■□□□□ -0
VPS25-201ENST00000253794 MYO6Q9UM54 1294 aa15.05■□□□□ -0
VPS25-201ENST00000253794 FHOD1Q9Y613 1164 aa15.05■□□□□ -0
VPS25-201ENST00000253794 A0A1W2PQJ5 194 aa15.04■□□□□ -0
VPS25-201ENST00000253794 WDR27A2RRH5 827 aa15.04■□□□□ -0
VPS25-201ENST00000253794 A8MXQ7 604 aa15.04■□□□□ -0
VPS25-201ENST00000253794 CLASP2O75122 1294 aaKnown RBP15.04■□□□□ -0
VPS25-201ENST00000253794 CLSTN1O94985 981 aa15.04■□□□□ -0
VPS25-201ENST00000253794 PAPLNO95428 1278 aa15.04■□□□□ -0
VPS25-201ENST00000253794 PAEPP09466 180 aa15.04■□□□□ -0
VPS25-201ENST00000253794 CD58P19256 250 aa15.04■□□□□ -0
VPS25-201ENST00000253794 OR1D2P34982 312 aa15.04■□□□□ -0
VPS25-201ENST00000253794 CLCN4P51793 760 aa15.04■□□□□ -0
VPS25-201ENST00000253794 RAD23BP54727 409 aa15.04■□□□□ -0
VPS25-201ENST00000253794 MAPRE1Q15691 268 aaKnown RBP15.04■□□□□ -0
VPS25-201ENST00000253794 NFE2Q16621 373 aaPredicted RBP15.04■□□□□ -0
VPS25-201ENST00000253794 DUSP6Q16828 381 aa15.04■□□□□ -0
VPS25-201ENST00000253794 RTL10Q7L3V2 364 aa15.04■□□□□ -0
VPS25-201ENST00000253794 VSTM4Q8IW00 320 aa15.04■□□□□ -0
VPS25-201ENST00000253794 FAM71AQ8IYT1 594 aa15.04■□□□□ -0
VPS25-201ENST00000253794 DCP1BQ8IZD4 617 aaKnown RBP15.04■□□□□ -0
VPS25-201ENST00000253794 DEFB123Q8N688 67 aa15.04■□□□□ -0
VPS25-201ENST00000253794 SLC4A11Q8NBS3 891 aa15.04■□□□□ -0
VPS25-201ENST00000253794 ZNF461Q8TAF7 563 aa15.04■□□□□ -0
VPS25-201ENST00000253794 MYCBPAPQ8TBZ2 947 aa15.04■□□□□ -0
VPS25-201ENST00000253794 C2orf15Q8WU43 125 aaKnown RBP15.04■□□□□ -0
VPS25-201ENST00000253794 HDAC7Q8WUI4 952 aa15.04■□□□□ -0
VPS25-201ENST00000253794 TWNKQ96RR1 684 aa15.04■□□□□ -0
VPS25-201ENST00000253794 GAS2L1Q99501 681 aaPredicted RBP15.04■□□□□ -0
VPS25-201ENST00000253794 CDX2Q99626 313 aaPredicted RBP15.04■□□□□ -0
VPS25-201ENST00000253794 NUP58Q9BVL2 599 aa15.04■□□□□ -0
VPS25-201ENST00000253794 ELOVL4Q9GZR5 314 aa15.04■□□□□ -0
VPS25-201ENST00000253794 DNAI2Q9GZS0 605 aa15.04■□□□□ -0
VPS25-201ENST00000253794 CRTAC1Q9NQ79 661 aa15.04■□□□□ -0
VPS25-201ENST00000253794 KIAA1257Q9ULG3 409 aa15.04■□□□□ -0
VPS25-201ENST00000253794 F8VZ95 297 aa15.03■□□□□ -0
VPS25-201ENST00000253794 HCRTO43612 131 aa15.03■□□□□ -0
VPS25-201ENST00000253794 VNN2O95498 520 aa15.03■□□□□ -0
VPS25-201ENST00000253794 ATF2P15336 505 aa15.03■□□□□ -0
VPS25-201ENST00000253794 PTPN1P18031 435 aaKnown RBP15.03■□□□□ -0
VPS25-201ENST00000253794 RPL17P18621 184 aaKnown RBP15.03■□□□□ -0
VPS25-201ENST00000253794 ZNF75DP51815 510 aa15.03■□□□□ -0
VPS25-201ENST00000253794 POLR2FP61218 127 aaKnown RBP15.03■□□□□ -0
VPS25-201ENST00000253794 CFAP221Q4G0U5 840 aa15.03■□□□□ -0
VPS25-201ENST00000253794 SPECC1LQ69YQ0 1117 aa15.03■□□□□ -0
VPS25-201ENST00000253794 TMEM184AQ6ZMB5 413 aa15.03■□□□□ -0
VPS25-201ENST00000253794 Q7L0L9 218 aa15.03■□□□□ -0
VPS25-201ENST00000253794 ADGRD2Q7Z7M1 963 aa15.03■□□□□ -0
VPS25-201ENST00000253794 LRRTM3Q86VH5 581 aa15.03■□□□□ -0
VPS25-201ENST00000253794 B3GALNT2Q8NCR0 500 aa15.03■□□□□ -0
VPS25-201ENST00000253794 SLC22A17Q8WUG5 538 aa15.03■□□□□ -0
VPS25-201ENST00000253794 TMEM176AQ96HP8 235 aa15.03■□□□□ -0
VPS25-201ENST00000253794 FUBP3Q96I24 572 aaKnown RBP eCLIP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms