RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 PNMA6AP0CW24 399 aaPredicted RBP13.77□□□□□ -0.21
LSM8-201ENST00000249299 LAG3P18627 525 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 CD58P19256 250 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 MSNP26038 577 aaKnown RBP13.77□□□□□ -0.21
LSM8-201ENST00000249299 CDH5P33151 784 aaPredicted RBP13.77□□□□□ -0.21
LSM8-201ENST00000249299 OR1G1P47890 313 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 CDH8P55286 799 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 MAPRE1Q15691 268 aaKnown RBP13.77□□□□□ -0.21
LSM8-201ENST00000249299 SGO2Q562F6 1265 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 ARHGAP17Q68EM7 881 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 ALKBH5Q6P6C2 394 aaKnown RBP13.77□□□□□ -0.21
LSM8-201ENST00000249299 C3orf58Q8NDZ4 430 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 OR6B3Q8NGW1 331 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 VCPIP1Q96JH7 1222 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 CALR3Q96L12 384 aaKnown RBP13.77□□□□□ -0.21
LSM8-201ENST00000249299 RAD9AQ99638 391 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 ACBD6Q9BR61 282 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.77□□□□□ -0.21
LSM8-201ENST00000249299 PAAF1Q9BRP4 392 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 TSGA10Q9BZW7 698 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 AAASQ9NRG9 546 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 CDH9Q9ULB4 789 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 PYCARDQ9ULZ3 195 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 CEP83Q9Y592 693 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 SLC4A7Q9Y6M7 1214 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 SF3B1O75533 1304 aaKnown RBP eCLIP13.77□□□□□ -0.217e-9■■■■■ 35.7
LSM8-201ENST00000249299 SCN5AQ14524 2016 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 MICAL3Q7RTP6 2002 aa13.77□□□□□ -0.21
LSM8-201ENST00000249299 COL4A6Q14031 1691 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 A0A087X0T9 212 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 BTNL10A8MVZ5 291 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 UPP2O95045 317 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 EFEMP2O95967 443 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 FAM228BP0C875 321 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 CHRNB2P17787 502 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 IBSPP21815 317 aaPredicted RBP13.76□□□□□ -0.21
LSM8-201ENST00000249299 PPM1AP35813 382 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 BCAR1P56945 870 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 DEFB103AP81534 67 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 FMO1Q01740 532 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 BTG3Q14201 252 aaPredicted RBP13.76□□□□□ -0.21
LSM8-201ENST00000249299 WSCD1Q658N2 575 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 GLYCTKQ8IVS8 523 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 TNS4Q8IZW8 715 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 CCAR2Q8N163 923 aaKnown RBP13.76□□□□□ -0.21
LSM8-201ENST00000249299 THEM5Q8N1Q8 247 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 OLIG1Q8TAK6 271 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 ELMO3Q96BJ8 720 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 YME1L1Q96TA2 773 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 MRPL45Q9BRJ2 306 aaKnown RBP13.76□□□□□ -0.21
LSM8-201ENST00000249299 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.76□□□□□ -0.21
LSM8-201ENST00000249299 ELOVL4Q9GZR5 314 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 ISCUQ9H1K1 167 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 CWH43Q9H720 699 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 DNAJB4Q9UDY4 337 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 PPP2R2CQ9Y2T4 447 aa13.76□□□□□ -0.21
LSM8-201ENST00000249299 MKI67P46013 3256 aaKnown RBP13.75□□□□□ -0.21
LSM8-201ENST00000249299 ZBBXA8MT70 800 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 ESPNB1AK53 854 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 PJA2O43164 708 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 THAP12O43422 761 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 B4GALT3O60512 393 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 RTN2O75298 545 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 CYP1A1P04798 512 aaPredicted RBP13.75□□□□□ -0.21
LSM8-201ENST00000249299 SETSIPP0DME0 302 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 MAGEA1P43355 309 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 RAP1GAPP47736 663 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 SLC11A1P49279 550 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 VAV2P52735 878 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 EPHB4P54760 987 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 YWHAHQ04917 246 aaPredicted RBP13.75□□□□□ -0.21
LSM8-201ENST00000249299 SMARCB1Q12824 385 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 MTF1Q14872 753 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 LCLAT1Q6UWP7 414 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.75□□□□□ -0.21
LSM8-201ENST00000249299 TOGARAM2Q6ZUX3 1019 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 HERC6Q8IVU3 1022 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 TMEM35BQ8NCS4 154 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 LNX1Q8TBB1 728 aaPredicted RBP13.75□□□□□ -0.21
LSM8-201ENST00000249299 STK32AQ8WU08 396 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 UBE2Q2Q8WVN8 375 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 CLP1Q92989 425 aaKnown RBP13.75□□□□□ -0.21
LSM8-201ENST00000249299 TRIM11Q96F44 468 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 HEXIM2Q96MH2 286 aaKnown RBP13.75□□□□□ -0.21
LSM8-201ENST00000249299 ZNF558Q96NG5 402 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 MIS12Q9H081 205 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 RWDD3Q9Y3V2 267 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 PCDHA13Q9Y5I0 950 aa13.75□□□□□ -0.21
LSM8-201ENST00000249299 ANKRD62A6NC57 917 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 H7C4K7 107 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 O00370 1275 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 ZNF263O14978 683 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 KRT86O43790 486 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 ZNF500O60304 480 aaPredicted RBP13.74□□□□□ -0.21
LSM8-201ENST00000249299 MMEP08473 750 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 H2AFZP0C0S5 128 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 MYBL1P10243 752 aa13.74□□□□□ -0.21
LSM8-201ENST00000249299 UNGP13051 313 aaPredicted RBP13.74□□□□□ -0.21
LSM8-201ENST00000249299 ATP2A2P16615 1042 aaKnown RBP13.74□□□□□ -0.21
LSM8-201ENST00000249299 FGFR3P22607 806 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms