RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 TRIP6Q15654 476 aaKnown RBP13.05□□□□□ -0.32
RFPL3-201ENST00000249007 XKR4Q5GH76 650 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 CENPPQ6IPU0 288 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 GALNT17Q6IS24 598 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 CC2D1AQ6P1N0 951 aaPredicted RBP13.05□□□□□ -0.32
RFPL3-201ENST00000249007 Q6ZUG5 572 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 TTC30AQ86WT1 665 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 TRIM22Q8IYM9 498 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 CMTM8Q8IZV2 173 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 PNPLA1Q8N8W4 532 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 CCDC26Q8TAB7 109 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 DEPTORQ8TB45 409 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 BSNDQ8WZ55 320 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 SLC39A7Q92504 469 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 C18orf25Q96B23 403 aaPredicted RBP13.05□□□□□ -0.32
RFPL3-201ENST00000249007 CRELD1Q96HD1 420 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 SPACA7Q96KW9 195 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 FNBP1Q96RU3 617 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 SLC46A2Q9BY10 475 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 OXCT2Q9BYC2 517 aaPredicted RBP13.05□□□□□ -0.32
RFPL3-201ENST00000249007 FSCN3Q9NQT6 498 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 TBX20Q9UMR3 447 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 CCL26Q9Y258 94 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 KIAA1549LQ6ZVL6 1849 aa13.05□□□□□ -0.32
RFPL3-201ENST00000249007 TNRC6BQ9UPQ9 1833 aaKnown RBP13.05□□□□□ -0.32
RFPL3-201ENST00000249007 A0A087WWV3 80 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 SOAT2O75908 522 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 OAZ2O95190 189 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 CD59P13987 128 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 CPA1P15085 419 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 ATP2B1P20020 1258 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 HOXD12P35452 270 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 GRM5P41594 1212 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 OSTNP61366 133 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 TSGA10IPQ3SY00 556 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 LYSMD4Q5XG99 296 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 LMBRD2Q68DH5 695 aaPredicted RBP13.04□□□□□ -0.32
RFPL3-201ENST00000249007 ZNF605Q86T29 641 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 CPA6Q8N4T0 437 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 MINDY1Q8N5J2 469 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 TTC9BQ8N6N2 239 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 ATAD1Q8NBU5 361 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 RLN3Q8WXF3 142 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 CD101Q93033 1021 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 NCOA5Q9HCD5 579 aaKnown RBP13.04□□□□□ -0.32
RFPL3-201ENST00000249007 ZMYM5Q9UJ78 669 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 PILRBQ9UKJ0 227 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 SLC6A14Q9UN76 642 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 PCDHB9Q9Y5E1 797 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 TIMM13Q9Y5L4 95 aaPredicted RBP13.04□□□□□ -0.32
RFPL3-201ENST00000249007 PTPRDP23468 1912 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 USP9XQ93008 2570 aaPredicted RBP13.04□□□□□ -0.32
RFPL3-201ENST00000249007 ZNF638Q14966 1978 aaKnown RBP13.04□□□□□ -0.32
RFPL3-201ENST00000249007 KNTC1P50748 2209 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 MGAQ8IWI9 3026 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 ATMQ13315 3056 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 GOLGA6L3A6NEY3 463 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 BAG4O95429 457 aaKnown RBP13.04□□□□□ -0.32
RFPL3-201ENST00000249007 KCNE1P15382 129 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 ITPKAP23677 461 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 P2RY2P41231 377 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 NAMPTP43490 491 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 VEPH1Q14D04 833 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 PDGFRLQ15198 375 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 C2orf27AQ580R0 203 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 NT5DC1Q5TFE4 455 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 LARP1BQ659C4 914 aaKnown RBP13.04□□□□□ -0.32
RFPL3-201ENST00000249007 OLIG1Q8TAK6 271 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 CEP76Q8TAP6 659 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 USP13Q92995 863 aaPredicted RBP13.04□□□□□ -0.32
RFPL3-201ENST00000249007 CAMK1GQ96NX5 476 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 NAP1L4Q99733 375 aaKnown RBP13.04□□□□□ -0.32
RFPL3-201ENST00000249007 KIFC3Q9BVG8 833 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 IL21Q9HBE4 155 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 DKK4Q9UBT3 224 aa13.04□□□□□ -0.32
RFPL3-201ENST00000249007 CITO14578 2027 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 MTMR11A4FU01 709 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 OR6C75A6NL08 312 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 ESPNB1AK53 854 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 SH3BP5O60239 455 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 ALDH1A2O94788 518 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 XRCC6P12956 609 aaKnown RBP eCLIP13.03□□□□□ -0.32
RFPL3-201ENST00000249007 EFNA5P52803 228 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 CCT2P78371 535 aaKnown RBP13.03□□□□□ -0.32
RFPL3-201ENST00000249007 CRY1Q16526 586 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 DUOXA1Q1HG43 343 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 ZNF568Q3ZCX4 644 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 SPDYCQ5MJ68 293 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 PEAR1Q5VY43 1037 aaPredicted RBP13.03□□□□□ -0.32
RFPL3-201ENST00000249007 USP37Q86T82 979 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 OR2I1PQ8NGU4 316 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 USP33Q8TEY7 942 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 LPIN3Q9BQK8 851 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 ECT2Q9H8V3 914 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 KIF9Q9HAQ2 790 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 TDP1Q9NUW8 608 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 PCDHA12Q9UN75 941 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 TNFSF13BQ9Y275 285 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 RAI2Q9Y5P3 530 aa13.03□□□□□ -0.32
RFPL3-201ENST00000249007 A0A087WV48 116 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms